Gene SO_A0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0169 
Symbol 
ID1172592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp158719 
End bp159096 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content43% 
IMG OID637346606 
ProductISSod9 hypothetical protein 
Protein accessionNP_720483 
Protein GI24376375 
COG category[S] Function unknown 
COG ID[COG2361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.194296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGA ACCGTTTACC TGATTATCTT GACCACATGC ACCAAGCCGC TTCCGATGCG 
TGTTATTTTG TTGAAGGGTT GGATAAAGAT GAATTTTTAG TGGATAAACG TACCCAACAG
GCTGTCATCA TGAGTCTGAT CGTAATTGGT GAAGCATCAA CTAAGGTGAT GGACGGTTAT
TCTGAGTTTG TCATTGCCCA TTCAGACGTT CCATGGCGTA GTATGCGTGG AATGCGCAAT
CGCATTGCTC ATGGTTATTT CGATATAAAC CTTGATGTGG TTTGGGATAC GGTACAAACG
GCGCTGCCAA CATTATTATC GCAGCTGGCA GCGGTTAGAT ATGATGTAGA TAAAAATGAA
GGTCATGATT TATGCTGA
 
Protein sequence
MKVNRLPDYL DHMHQAASDA CYFVEGLDKD EFLVDKRTQQ AVIMSLIVIG EASTKVMDGY 
SEFVIAHSDV PWRSMRGMRN RIAHGYFDIN LDVVWDTVQT ALPTLLSQLA AVRYDVDKNE
GHDLC