| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0165 |
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| Symbol | |
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| ID | 1172588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | + |
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| Start bp | 154093 |
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| End bp | 154962 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637346603 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_720480 |
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| Protein GI | 24376372 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.705858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATT GGGAAGGCGT TAGCGAATTT GTAGCCGTTG CAGAGGCAGA GAGCTTTACT
AAGGCTGCAA AACAGCTTGG GATATCTACC GCGCAAGTCA GCAGGCAGGT CAGCGCATTA
GAAACCCGAA TGGCTACTAA GCTGTTTCAC CGCACCACAC GTAAAGTGTC GGTGAGCGAA
GTGGGCCGGA TCTATTATCA ACACTGCAGA CAAGTGCTGG ATGGATTAGA AGAGGCCGAG
CGCGCGATTA CTAATTTACA GAGTACACCG AGAGGGCTGT TAAAAATTAC CGCCCCAGTA
ACTTATGGTG AAAAAACGCT TGTGCCGCTG GTGAACGATT TTATCGCTAA ATACCCAGAG
CTTGAAGTAA AGATAAATCT AACGAATCAG AAGGTCGACT TAATCGATGA TGGGTACGAT
CTCGCCATTC GACTCGGACA GCTTAAAGAC TCGAGTATTA TGGCCAAAAG ACTAGGCTCA
AGAACTCAAT ATGTCTGCGC CTCCCCAGAT TATGTTTCAA CTTTTGGAAT ACCTCACTCA
CTGTCTGAGC TGGAACAGCA TAACTGTCTG TTGGGAACAT TAGATTACTG GCGATTTCAG
GAAAATGGAA AGACGAGAAA TGTCAGGGTT AAGGGTAATT TGACCTGTAA CAGTGGCTAT
GCACTCGTTG ATGCCGCGAT AAAAGGCATA GGCATCATTC AGCTACCTGA GTACTATGTA
TTGCCTTTTT TAGAAGATGG ACAGCTTGTT CCACTGTTGG AGCAAAACCG TCAACCTAAA
GAGGGGATCT GGGCACTCTA TCCTCACAAC CGGCACTTAT CACCTAAAGT GCGCATGCTA
CTTGATTATC TGAGTGAAGC TCTGAGTTAA
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| Protein sequence | MFNWEGVSEF VAVAEAESFT KAAKQLGIST AQVSRQVSAL ETRMATKLFH RTTRKVSVSE
VGRIYYQHCR QVLDGLEEAE RAITNLQSTP RGLLKITAPV TYGEKTLVPL VNDFIAKYPE
LEVKINLTNQ KVDLIDDGYD LAIRLGQLKD SSIMAKRLGS RTQYVCASPD YVSTFGIPHS
LSELEQHNCL LGTLDYWRFQ ENGKTRNVRV KGNLTCNSGY ALVDAAIKGI GIIQLPEYYV
LPFLEDGQLV PLLEQNRQPK EGIWALYPHN RHLSPKVRML LDYLSEALS
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