Gene SO_A0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0142 
Symbol 
ID1172565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp130884 
End bp131924 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content47% 
IMG OID637346582 
ProductISSod13, transposase 
Protein accessionNP_720459 
Protein GI24376351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCATA GTAACAATCC AATCATCAAA CACAAAACAG GTTTACTCAA TCTGGCAGAG 
GAACTGAGCA ACGTCTCCAG AGCCTGCAAA GTCATGGGTG TGTCTCGTGA TACGTTTTAT
CGTTACCGCG AGTTAGTGGA CGATGGCGGT GTTGATGCAC TGATCGAAAA AAGTCGTAGA
AGTCCAAATC TCAAGAACCG TGTCGAAGAA GCTGTTGAAC AGGCAGTGAT GGAGTATGCG
ATTGAATTTC CCGCCCATGG CCAACACAGA ACCAGCAATG AACTGCGCAA AAAAGGCGTG
TTTGTTTCTG GCAGTGGTGT CCGCTCAATC TGGTTGCGAC ATGATTTAGA GAACTTTAAG
AAGCGACTGA AAGCCTTGGA AGCCAAAGTA GCTCGCGATG GCATTCAACT TACTGATGAA
CAGATTGCGG CACTTGAGCG CAAAAAACAC GACGATGAAG CCTGTGGTGA GATTGAAACC
GCGCACCCAG GCTACCTTGG GTCGCAAGAC ACGTTTTATG TCGGAAACCT CAAGGGCGTT
GGTCGTATCT ATCAGCAAAC CTATGTCGAT ACGTACTGCA AAGTCGCTCA TTGCAAGCTC
TATACTACGA AAACACCTAT CACTGCAGCG GACTTATTGA ACGACAAAGT ATTGCCGTTT
TACGAGTCAC AGCAGTTGCC GGTGCTGCGT ATTTTAACTG ACCGTGGCAC AGAGTATTGC
GGCAAGGTCG AGCACCATGA TTACCAGCTA TATCTGGCGA TTAATGATAT CGACCACACG
AAAACCAAAG CGATGTCGCC GCAAACGAAT GGGATCTGCG AGCGGTTTCA TAAGACGATC
CTGAACGAGT TTTATCAGGT GACCTTCCGC AAAAAGCTGT ACCAAACGCT GGAGGAGCTG
CAAAAAGATC TGGACGAGTG GCTGTCTTAC TACAACAATG AACGCACTCA TCAAGGCAAA
ATGTGCAACG GCAGAACGCC AGTTGAAACA TTGATTGATG GGAAACGGGT TTGGGCGGAA
AAGAATCTGA CTCGAATCTA A
 
Protein sequence
MLHSNNPIIK HKTGLLNLAE ELSNVSRACK VMGVSRDTFY RYRELVDDGG VDALIEKSRR 
SPNLKNRVEE AVEQAVMEYA IEFPAHGQHR TSNELRKKGV FVSGSGVRSI WLRHDLENFK
KRLKALEAKV ARDGIQLTDE QIAALERKKH DDEACGEIET AHPGYLGSQD TFYVGNLKGV
GRIYQQTYVD TYCKVAHCKL YTTKTPITAA DLLNDKVLPF YESQQLPVLR ILTDRGTEYC
GKVEHHDYQL YLAINDIDHT KTKAMSPQTN GICERFHKTI LNEFYQVTFR KKLYQTLEEL
QKDLDEWLSY YNNERTHQGK MCNGRTPVET LIDGKRVWAE KNLTRI