| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0106 |
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| Symbol | |
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| ID | 1172529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | + |
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| Start bp | 85324 |
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| End bp | 86964 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637346555 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_720432 |
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| Protein GI | 24376324 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.827543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA ACATGACTTT AGCACAGAGA TTGATCTCTG TTTTTTTTAT TCTTTCTTTA
CTTGTTTTGG GGGTAGCTTG GTTTTCAGTT GTTCAACTTG CTGGTTTGCA TAGTAATACA
ACTAAAATTA CTGAGAATCT GATCCCTTCT ATTCGTTCGT CCGCTCAAAT GCATATTGCC
TTGCTTGATG CACGGCGTAA CGAATTGAAT ATGGTTATTG ACGTGATGAC ACACGATTCC
GCAGCAATAG AGATTAGCAA ACAGCGCTTT GAGACAGCCA AAAGCGAATT TGAAGCTGGC
GCCCAACAAT ATGCCAAACT GAATTTTGTG TCTGAGCAAG ATGAACAACT GTTTATTAAA
CTTGGCGAGG CTGCCGAAAA ATATTTCTCT GCACACTCGT CATTGGTTTC TGCGATTGAC
CAAGGAGATA TGGCAAGTGC AAATATAATG ATCAAAACAT TGACCAGACA GACTTTAGAG
GTAGCAGGTG AAGAAACGAT GAATTTGCGA CATGAAAATG ATCGCGCTGC ACAGGAGATG
GTATTACAGA GTGAGAATGC CTATAAAACA GCCAAAATGC TCAGCATTAT AGTGGGTTTT
AGTACAATAT TTTTTGTGGT GGTTATGGCA TTTTTGCTGA TTCGTCAGAT CCAAAACCCC
ATAATGTGGT TATTGAAACA AACTCATGAG GTATCTGCTG GCAACTTAAC GAATAAACTC
AACATGAATG CGTTTGCCCG TGATGAGTTT GGTCAGTTGG CAGAGAGTTT TAACGAGATG
CAAGATAACT TGCATATGTT GGTTAGCGAG GTTTCTAACT CTATAGTACA ACTTAGCTCC
GCAGCGGAAG AGATCAGTTC AGTTGCTTTG CATTCTTCCA ACAATATGGA GACTCAGCAA
AATGAGTTAA ACCAGTTGGC AACCGCAATG CATGAGATGC AGGCTACTGT GCAAGACGTC
GCTCGTAATA CCAACGATGC CGCTAATGCA GCGACACAGG CAAGTGACAC CGCTACACAA
GGTAGTGAAA CTGTGAATGA CTCGATTGTA CGAATTGATA AGGTTGCCGG AGCAATAGAA
GCAACTGCTG TAGTGATCCG CAAATTAGGA GATGATAGTC GTAATATCGG GATGGTCTTG
GAGGTGATCC AAGGTATCGC AGAACAAACC AACTTGTTAG CATTGAATGC GGCCATTGAA
GCTGCAAGGG CTGGCGAGCA AGGTAGAGGG TTTGCTGTTG TGGCTGATGA GGTACGAACA
CTAGCTAAAC GGACACAGGA CTCAACCTCT CACATCAATA GTATCATTTC TGAATTACAG
CTACGGGCCA ATGAAGCAGA GGAAACAATG CAACAAAGCC AAGAGATGAT GATAGAAACT
GTTTGCAAGG CAAGAGAAGC TGGTGAGTCG ATTGCTAAAA TAAGCAGCTC AGTGAGTTGT
ATTTCTCAAA TGAATATTCA GATTGCTACC GCAACGGAAG AACAGGGAGC CGTAAGCGAA
GAGCTAAACC GTAATGTGGC AAATATTAGC GGGGCTTCCG AAGATGTGGC AACCGGCGCG
AAACAGATGG CAATGGCATG TAACGATTTA AGTCATCTGG CCACGCAGTT ACAGGATATG
GTGAAGAAGT TTCATATTTA A
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| Protein sequence | MFKNMTLAQR LISVFFILSL LVLGVAWFSV VQLAGLHSNT TKITENLIPS IRSSAQMHIA
LLDARRNELN MVIDVMTHDS AAIEISKQRF ETAKSEFEAG AQQYAKLNFV SEQDEQLFIK
LGEAAEKYFS AHSSLVSAID QGDMASANIM IKTLTRQTLE VAGEETMNLR HENDRAAQEM
VLQSENAYKT AKMLSIIVGF STIFFVVVMA FLLIRQIQNP IMWLLKQTHE VSAGNLTNKL
NMNAFARDEF GQLAESFNEM QDNLHMLVSE VSNSIVQLSS AAEEISSVAL HSSNNMETQQ
NELNQLATAM HEMQATVQDV ARNTNDAANA ATQASDTATQ GSETVNDSIV RIDKVAGAIE
ATAVVIRKLG DDSRNIGMVL EVIQGIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRT
LAKRTQDSTS HINSIISELQ LRANEAEETM QQSQEMMIET VCKAREAGES IAKISSSVSC
ISQMNIQIAT ATEEQGAVSE ELNRNVANIS GASEDVATGA KQMAMACNDL SHLATQLQDM
VKKFHI
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