| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0100 |
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| Symbol | |
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| ID | 1172523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 79656 |
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| End bp | 81470 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637346551 |
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| Product | hypothetical protein |
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| Protein accession | NP_720428 |
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| Protein GI | 24376320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCA TATCGTCAGT TGTTGTCTGT TTAAGCTTGA GTCCATTCGT TCATGCATCA
AGCCCCCCAA AAACCGATGC CGAAACCATT TATATTGGCG GCAACATTGT GACAGTAACC
GATTCAGCCC CTACAGCCGA GGCATTAGCA GTGAAGAATG GGCGAATTCT CGCCCTAGGC
AAGACATCTG ATTTATTGAA GCTAAAGGGT AGCAATACCC AAGTGGTCAA TCTAAACGGT
AAAACACTTA TCCCAGGGTT TATAGATGGA CACGGTCATG TATTCAACAC AGGGATCCAA
GCGCTATCAG CAAACCTACT CGCTCTTCCA GATGGGCACG TGAATGATAT TGCCGCACTT
CAACGGGAGT TAACGGTTTG GGCCAAGAAA CCCGAAAATG CCAAGCACGG CATCATACTC
GGATTTGGGT ATGACGATTC GCAATTGGCT GAACAAAGAC ATCCAACGCG CCAAGAATTA
GATGCAGTAT CTAATGATAT TCCCATTCTT ATCATCCACC AATCAGGTCA CTTAGCCACT
TTAAATACCA AAGCATTGAC GCTCGCAGGC TTTAACTCGA ACAGTAAAGA TCCTGAAGGA
GGCAAAATTC GCCGAGAGGC CGATGGAAAA ACCCCAAATG GCGTATTAGA GGAAACCGCA
TTTTTTGGCA CTCTGCTGCC GCTATTTGCC AAATTAAATG AAACAGAAAA TGAGGCCATT
TTCAATGCAG GAATGAAGCT CTATGCTAGC TTTGGTTATA CCACGGCTCA AGAAGGTCGA
GCCTCAAGCT CCGCTGTAAA AACCATGTAT AACCTAGCAC AGCAACAAAA ATTGCCGATT
GATGTCGCCG CTTATCCTGA TATTCAAACC GCGCAGGAAG TTATTGCTCC TCCCTATTTT
TCTGCTCACT ATAACAACGG GTTTCGTGTA GCGGGAGCCA AGTTAAATCT CGATGGTTCA
CCTCAAGGAA AGACTGCTTG GTTAACAAAA CCTTACTTAA TTCCCCCCGT AGGACAAGAG
CCTGATTATA AAGGCTATCC GAGTATGAGT GATGAAAAAG CGGCAGAATA TATTGCCTTA
GCTCAAAGTA AAGGCTGGCA ATTACTCACC CATGTCAATG GCGATGCCGC GATAGATCAA
CTACTAAAAG GGATTGAAGC TAGCGAGAAA ATATATGGGA AACCCGATCG GGGTTTTGTC
GCTATTCATG CACAAACGGC ACGTCAAGAT CAGATTGAGC GCTTTAAGCG TCTCGGCGTA
TTCCCTTCTT TCTTTCCCAT GCATACCTTC TACTGGGGCG ATTGGCATAT GGACTCGGTA
TTAGGTAAAG AAAGGGCCCA AAATATTTCC CCCACGGGTT GGGCAAGAGA GTTAGGCATG
ATTTACACCT CTCACCATGA CTCTCCAGTT GCACTTCCAA ATTCAATGCG TGTTTACTCT
GCAACGGTAA ATCGTATCAG TCGAACAGGG CGAGTATTAG GCCCAGCGCA AAAAGCATCA
CCATTGGAGG GCTTAAAATC TCAAACCATT TGGGCGGCCA CCCAGTATAA AGAGGAAGAG
AGTAAAGGCT CACTGGAAGT AGGCAAACTG GCAGATTTGG TAATTTTATC TGATAACCCA
CTAACAATAC CCGCAGAAAA ACTGGCTGAT ATTCAGATAA TTGAAACGAT TAAAGAAGGC
AAAACGGTAT ACAAACGAAA TGAACAACAA ACAAGTGACA AGGTTAACCA TGGTGGTTGT
ATTGACTCTC CTCGTTGCCA AGCTGTAGCC ACAACAGCAA TGGTCGCTGC AGGAGTCTTA
CATCATTCTC ATTAG
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| Protein sequence | MKFISSVVVC LSLSPFVHAS SPPKTDAETI YIGGNIVTVT DSAPTAEALA VKNGRILALG
KTSDLLKLKG SNTQVVNLNG KTLIPGFIDG HGHVFNTGIQ ALSANLLALP DGHVNDIAAL
QRELTVWAKK PENAKHGIIL GFGYDDSQLA EQRHPTRQEL DAVSNDIPIL IIHQSGHLAT
LNTKALTLAG FNSNSKDPEG GKIRREADGK TPNGVLEETA FFGTLLPLFA KLNETENEAI
FNAGMKLYAS FGYTTAQEGR ASSSAVKTMY NLAQQQKLPI DVAAYPDIQT AQEVIAPPYF
SAHYNNGFRV AGAKLNLDGS PQGKTAWLTK PYLIPPVGQE PDYKGYPSMS DEKAAEYIAL
AQSKGWQLLT HVNGDAAIDQ LLKGIEASEK IYGKPDRGFV AIHAQTARQD QIERFKRLGV
FPSFFPMHTF YWGDWHMDSV LGKERAQNIS PTGWARELGM IYTSHHDSPV ALPNSMRVYS
ATVNRISRTG RVLGPAQKAS PLEGLKSQTI WAATQYKEEE SKGSLEVGKL ADLVILSDNP
LTIPAEKLAD IQIIETIKEG KTVYKRNEQQ TSDKVNHGGC IDSPRCQAVA TTAMVAAGVL
HHSH
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