Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0018 |
Symbol | |
ID | 1172614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 16362 |
End bp | 16739 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637346480 |
Product | ISSod9 hypothetical protein |
Protein accession | NP_720357 |
Protein GI | 24376249 |
COG category | [S] Function unknown |
COG ID | [COG2361] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.231151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGTGA ACCGTTTACC TGATTATCTT GACCACATGC ACCAAGCCGC TTCCGATGCG TGTTATTTTG TTGAAGGGTT GGATAAAGAT GAATTTTTAG TGGATAAACG TACCCAACAG GCTGTCATCA TGAGTCTGAT CGTAATTGGT GAAGCATCAA CTAAGGTGAT GGACGGTTAT TCTGAGTTTG TCATTGCCCA TTCAGACGTT CCATGGCGTA GTATGCGTGG AATGCGCAAT CGCATTGCTC ATGGTTATTT CGATATAAAC CTTGATGTGG TTTGGGATAC GGTACAAACG GCGCTGCCAA CATTATTATC GCAGCTGGCA GCGGTTAGAT ATGATGTAGA TAAAAATGAA GGTCATGATT TATGCTGA
|
Protein sequence | MKVNRLPDYL DHMHQAASDA CYFVEGLDKD EFLVDKRTQQ AVIMSLIVIG EASTKVMDGY SEFVIAHSDV PWRSMRGMRN RIAHGYFDIN LDVVWDTVQT ALPTLLSQLA AVRYDVDKNE GHDLC
|
| |