Gene SO_4758 details

Gene Information

• Locus tag: SO_4758
• Symbol: gidA
• ID: 1172334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4967807
• End bp: 4969696
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637346462
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: NP_720274
• Protein GI: 24376230
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTTTC ATGAACGGTT TGATGTTATT GTTGTTGGTG GTGGTCACGC CGGAACTGAA 
GCCGCATTAG CAGCAGCAAG AATGGGCTCT AAGACATTAT TGCTAACGCA TAATCTTGAT 
ACTTTAGGCC AAATGTCATG TAACCCTGCG ATCGGGGGTA TTGGTAAAGG TCATTTGGTA 
AAAGAAATCG ATGCCTTAGG CGGTGCAATG GCGATCGCTA CCGACTATGC AGGGATCCAA 
TTTAGAACAT TAAACTCGAG TAAAGGTCCA GCAGTAAGAG CCACTCGAGC TCAGGCAGAT 
CGCGCTTTAT ATCGTCAAAA GATCCAAAAT ATTCTGCAAA ACCAAGCTAA TTTACGTATT 
TTCCAACAAG CAGTAGATGA TATTGTTGTG GAAAACGATC ACGTTGTGGG TGTAGTTACC 
CAAATGGGTT TAGCCTTTGA AGCATCAGCA GTAGTGTTAA CTGCTGGAAC TTTCCTCAGT 
GGTAAGATCC ATATCGGTTT AGAGAATTAC AGCGGCGGTC GTGCAGGCGA TCCGCCATCT 
ATCGCACTTG CCCATCGCTT ACGCGAGTTG CCTATCCGTG TTGGCCGTTT AAAAACCGGT 
ACACCACCAC GTATCGATGC CAATACCATT GATTTTTCGC AAATGACCGA GCAAAAAGGC 
GATACGCCAC TACCTGTGAT GTCATTTATG GGTGATGTGA GCCATCATCC GAAACAGATT 
TCTTGCTGGA TCACTCATAC CAATGAAAAA ACTCACGATA TTATTCGTGG AGGCTTAGAT 
AGAAGCCCAA TGTATTCGGG GGTGATCGAG GGGATCGGCC CACGTTACTG TCCGTCAATT 
GAAGATAAGA TCCATCGTTT TTCAGATAAA TCATCGCACC AGATCTTTAT CGAGCCGGAA 
GGATTAACCA CTAACGAGAT CTACCCTAAC GGCATATCCA CTAGCCTCCC ATTTGATGTG 
CAGTTAAATT TAGTTCGTTC GATCAAAGGC ATGGAGAATG CTGAGATTGT GCGTCCTGGT 
TATGCAATTG AGTATGATTA TTTTGATCCT AGAGATCTTA AAAACTCATT AGAAACCAAA 
ACCATCAATG GTTTGTTTTT CGCAGGCCAA ATCAACGGCA CTACAGGTTA TGAAGAAGCG 
GGTGCCCAAG GTTTACTTGC GGGGATGAAC GCATCATTGC AAGTTCAAGG TAAAGAAGCA 
TGGTGCCCTC GCCGTGATGA AGCTTACATT GGCGTATTGG TTGATGATTT ATCAACCTTA 
GGTACGAAAG AACCCTACCG CATGTTCACT AGCCGTGCGG AATATCGTTT ATTGCTCCGT 
GAAGATAACG CCGATCTGCG TTTAACAGCC AAAGGGCGTG AGCTCGGTTT AGTAGATGAT 
GCTCGTTGGG CTGCATTCAG TGAAAAAATG GAATCGATCG AATTAGAGCT GCAGCGTCTA 
CGTAGCCAAT GGATCCATCC TAATTCACCA TTGGTGCCAG TGTTAAATCC ACACTTGAAC 
ACGCCGATTT CTCGCGAAGC ATCTTTTGAA GAATTACTCC GTCGTCCTGA AATGGATTAT 
AACAAACTGA TGCAGATTGA AGGTTTTGGC CCTGGTCTTG CCGATCCTCT TGCCGCAGAG 
CAAGTACAAA TCCAAGTGAA GTATTCGGGT TATATCCAAC GTCAGCAAGA AGAGATCAAT 
AAAGCGGTAC GTAACGAAAA TACGGGGCTG CCATTAAACC TTGATTATAA AGAGGTTCCA 
GGTTTGTCAA ATGAGGTTAT CGCTAAGTTA AATAGCCATA AGCCCGAAAC CATTGGCCAA 
GCATCTCGTA TTTCAGGTAT TACTCCCGCA GCAATTTCAA TTCTGCTTGT ACATTTGAAA 
AAACGCGGTT TATTACGCAA GAGCGCGTAA 

 

Protein sequence

MHFHERFDVI VVGGGHAGTE AALAAARMGS KTLLLTHNLD TLGQMSCNPA IGGIGKGHLV 
KEIDALGGAM AIATDYAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQN ILQNQANLRI 
FQQAVDDIVV ENDHVVGVVT QMGLAFEASA VVLTAGTFLS GKIHIGLENY SGGRAGDPPS 
IALAHRLREL PIRVGRLKTG TPPRIDANTI DFSQMTEQKG DTPLPVMSFM GDVSHHPKQI 
SCWITHTNEK THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFSDK SSHQIFIEPE 
GLTTNEIYPN GISTSLPFDV QLNLVRSIKG MENAEIVRPG YAIEYDYFDP RDLKNSLETK 
TINGLFFAGQ INGTTGYEEA GAQGLLAGMN ASLQVQGKEA WCPRRDEAYI GVLVDDLSTL 
GTKEPYRMFT SRAEYRLLLR EDNADLRLTA KGRELGLVDD ARWAAFSEKM ESIELELQRL 
RSQWIHPNSP LVPVLNPHLN TPISREASFE ELLRRPEMDY NKLMQIEGFG PGLADPLAAE 
QVQIQVKYSG YIQRQQEEIN KAVRNENTGL PLNLDYKEVP GLSNEVIAKL NSHKPETIGQ 
ASRISGITPA AISILLVHLK KRGLLRKSA