Gene SO_4746 details

Gene Information

• Locus tag: SO_4746
• Symbol: atpC
• ID: 1172322
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4958161
• End bp: 4958589
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637346450
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: NP_720262
• Protein GI: 24376218
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGCCA TGACAGTACA GCTTGATATA GTCAGCGCAG AGAGCAGCAT CTTCTCTGGT 
CGCGTAGCTA GCCTACAAGT GACCGGTTCT GAAGGTGAGT TGGGCATCAT GCATGGCCAT 
GCTCCACTGT TAAGCTATAT CAAACCTGGC ATGGCGCGCA TCGTCAAACA AGACGGTAAC 
GAAGAAGTGT TTTACCTTTC TGGTGGTTTA CTAGAAGTAC AACCTTCTTC TGTTTCTGTG 
TTGGCTGATG TGGTTATGCG TGCCAAAGAT ATTGATGAGC AGGCAGCATT AGAAGCTAAG 
CGTCGTGCAG AAGCCCATAT GGCAACTGCG GGTGCGGACT TCAATTATGA TGCCGCTATG 
GTTGAGTTAG CGAAAGCAAT GGCTCAATTA CGTGTTGTTG AAACCATCAA GAAAAACATT 
GCCAGATAA 

 

Protein sequence

MAAMTVQLDI VSAESSIFSG RVASLQVTGS EGELGIMHGH APLLSYIKPG MARIVKQDGN 
EEVFYLSGGL LEVQPSSVSV LADVVMRAKD IDEQAALEAK RRAEAHMATA GADFNYDAAM 
VELAKAMAQL RVVETIKKNI AR