| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4734 |
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| Symbol | |
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| ID | 1172313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4939626 |
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| End bp | 4941920 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637346438 |
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| Product | sensory box protein |
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| Protein accession | NP_720250 |
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| Protein GI | 24376206 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCCA TTGTGCAATC GGCACAAGCA TTACAGGATA TAGAACGCAT TGAGCAGGAG
GTCTCTCTCG CGACGTTAGA TATGAATGTT ATGGTCTATA TCTTGCTCGA TGCAAACAGC
CGGATTCGAT TTGCTAATCA TGCAGTTTGG CGCGATAGCA ATGCGATTGA AGTGATAGAT
GGGTACGATG TAATTCAGCA CCATGCCGTA GTGCAATCAG GGTTGGCGAG TATTTCTGTT
AATCCCGAAA GGTTGTCTAT TCAAGCCTAT TATCCTGTTG AAGCCCAGTA TCCTGGAGCG
ACAGAGTTGG TTTATCTCGA GTCTGATTTA GCTCCTTTAG TAGCTAAAGC CTCAACTGAG
TTACAACAAC GATTTATGCG TGTATGGGGA CTTGGCGCCC TGCTGCTTAT TGGCTTTACC
TGCGTGTTAT ATTATTTGTT GATACGTCCA TTTAAGTTGT TAAGTAAATC GGCTAAGCAT
GTCGGTACAC CGGAATTTAC AATACAAGTA CCTTGGAGTG CTGCTGAGGT TTTATCTTTA
CAGACGAGTC TCCAACAGGT GCATGAGCGC TTAGGTCGAG CGGTTAAGCA GCTTAATGAT
AGTGAACAGC GCTGGTTGTT TGCCGTTGAA GGCTCGCGCA ATGGTATTTG GGATTGGGAT
CTTCGAACTG GTGAAGTATT TCTCTCCGAT CGATGGAAGG AAATGATTGG TTACCTTCCA
GATGAACTTG AAGGGGCATT CCAGACGTGG GAGGCGCGTT TACATCCAGA TGATAAGCAA
GCTGTGTTGA ATTGTCTGGA TGAATATGTG AGCGGCAAAA CAAAGGAGTT TGAGAGTGTG
CATCGCTTAC TACATCGCGA TGGCCATTAT GTTTGGGTTT TCGACCGTGG CATGTTAGTT
GACTGGGATC ATTTGGGGCG ACCTACCCGA ATGATTGGGA TTCATGTTGA TGTGTCTGAG
AGTGAGAAAA ACCATGCTGC TATTGCGGAG TTAGTTAAGC AATCTGCAAG TGGCCACCGA
ATGCTTCCTG AAGCGTTTAT GGAACAATTG TCTCAATACC TGTCTCAACG AAATCGTGCA
GGTTATTGGG GGGCTTTATT ATTCGTTAAT GTGGATACTC ATGATATTAG TGATTCGCTG
TCAACCCATG AACTAGAGCG ATTACTGTCT CAATTAGGCG CAAGACTTTC GAGCTATTTT
ACTGAGAATA TTGTTGTTGC ACATATTGAA TTTGGTAATT TTGCATTTTT AGTCAAAGAT
TTAGCTGTTG ATGCCGAAAT GGCTGGGCGC CGTGCCTTGG CCTTAGCAAC CGAGTTAAGG
CAAATCACGA TGCGTCCTTT CCATTATGGT GAGCATCATT TTAGTTTGGT TGCGAATCTG
GGTATTTGCT TATTAGATTC GGTTGAAACA CTTGCACCAG AACTTGTGGT TCGGCGTGCT
CAACTCGCAA TGGAGCATGG TAAGTCATCG GAACATGCAG GTTGTGCTTT CTATCATCCA
GACTTAGCGC GTGCATTGGA TCCTGAACCG TCATTACTCA ATGCATTGCA ACGGGCCATT
ACTGACAATC AGCTCTCATT GATGTTCCAG CCCGTTGTGG ATGTGTATGG CAAGATAGAG
TCTGCTGAAG TCTTATCTCG CTGGTCTTTA GCCAATGGAG AAATCGTCCC TGTTGCTCAA
TTTATTAGCT TAGCTGAGCA AAATGGATTG GTTGCCTCGC TTGATTTAAA TGTTACCGAG
CGAGTTTGCC AGTTAGTCAA ACAGTTTAGG CAACTTGGCA TTACGTTGCC GCGTTTGACG
TTGAATATAA GTACCTTATC TTTCTGCCAA GCTGATTTTA TTGAACAATT TATTGCTGTA
GTTCGTTCCT ATGAGCTTGA TGATAAGCAA CTGGGCGTTG AACTTGCTGA GAGTGTGTTC
CTTACATCTA AAGCATTTGT TGAGCCACGG ATTATTCAGT TAGTCGAGGC AGGGATTGCT
ATTACGTTAG ATAACTTTGG TGCCGGGCAG AGTGCCTTAA GTTGCCTACA TAACTACCCG
CTAACTGAGG TGAAGTTAGA TGTGCATTGT GCAGTAAGCT TGTTGAATGA TGCGAGTTGG
AACCAAGCAC TTATTCAAGC GGTACAACCT TTTAAACTGC CGATAGTGGC TAAAGGCGTT
GAATCGGTTC AGCAACAACA GCTATTTACC ACCTTAGGAT GTACCCATTT CCAAGGTTAC
AATATCGCTC GCGCCTTGAG TTTGAATGAT TTTAAACAGC TTGTTTGTCC ACGTCCCTTG
TTGCGTAGCG TTTAA
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| Protein sequence | MQAIVQSAQA LQDIERIEQE VSLATLDMNV MVYILLDANS RIRFANHAVW RDSNAIEVID
GYDVIQHHAV VQSGLASISV NPERLSIQAY YPVEAQYPGA TELVYLESDL APLVAKASTE
LQQRFMRVWG LGALLLIGFT CVLYYLLIRP FKLLSKSAKH VGTPEFTIQV PWSAAEVLSL
QTSLQQVHER LGRAVKQLND SEQRWLFAVE GSRNGIWDWD LRTGEVFLSD RWKEMIGYLP
DELEGAFQTW EARLHPDDKQ AVLNCLDEYV SGKTKEFESV HRLLHRDGHY VWVFDRGMLV
DWDHLGRPTR MIGIHVDVSE SEKNHAAIAE LVKQSASGHR MLPEAFMEQL SQYLSQRNRA
GYWGALLFVN VDTHDISDSL STHELERLLS QLGARLSSYF TENIVVAHIE FGNFAFLVKD
LAVDAEMAGR RALALATELR QITMRPFHYG EHHFSLVANL GICLLDSVET LAPELVVRRA
QLAMEHGKSS EHAGCAFYHP DLARALDPEP SLLNALQRAI TDNQLSLMFQ PVVDVYGKIE
SAEVLSRWSL ANGEIVPVAQ FISLAEQNGL VASLDLNVTE RVCQLVKQFR QLGITLPRLT
LNISTLSFCQ ADFIEQFIAV VRSYELDDKQ LGVELAESVF LTSKAFVEPR IIQLVEAGIA
ITLDNFGAGQ SALSCLHNYP LTEVKLDVHC AVSLLNDASW NQALIQAVQP FKLPIVAKGV
ESVQQQQLFT TLGCTHFQGY NIARALSLND FKQLVCPRPL LRSV
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