| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4726 |
|---|
| Symbol | mutM |
|---|
| ID | 1172305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 4930399 |
|---|
| End bp | 4931214 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637346430 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | NP_720242 |
|---|
| Protein GI | 24376198 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGAAT TACCAGAAGT CGAAGTCACG CGTCAGGGGA TAACCCCTTA CTTAGTCGAT
CAAACCGTGG TTGACCTAAT CGTGCGTAAC CCCTCCCTGC GTTGGCCAGT TCCTGAGCTT
GCCAAACAGA TCATTGGCCA AACCATACGC CAAGTGCGCC GCCGCGCTAA GTATCTGTTA
ATCGATACGG ATGCTGGCAC CAGCATAGTG CATTTGGGGA TGTCGGGCAG CCTAAGGATC
CTGCCCCATG ACACGCCAGT GGAGAAGCAT GACCATATCG ATCTCGTTCT CGCCAATGGC
CGCATTCTGC GCTTTAACGA CCCAAGACGC TTCGGCGCTT GGTTATGGTG CCAATTGCCA
GAGGAAGCCC ATCCGCTGCT GGAAAAACTC GGGCCAGAAC CTCTGACCGA TGCCTTTAAC
GTTAATCAGT TAGCTGCCTC GCTGGCGGGC AAGAAAAAGG CCATCAAGCT CTGTCTGATG
GATAACCATA TTGTGGTGGG CGTTGGGAAT ATTTACGCCA ATGAAGCACT GTTTGCCGCA
GGAATACACC CCGAGGCCGA GGCAGGCAAG ATAGATATTG AACGCTTAAC GGTACTGGTT
GCTGAGGTAA AACAAATCCT CGCCCACGCC ATCAAGCAAG GCGGCACCAC GCTTAAGGAC
TTCACCAACG CTGACGGTAA ACCCGGCTAT TTCGCGCAAA AGCTGCATGT ATACGGCCGC
GGCGGCGAAA CCTGTACACA GTGTGGTAAT TTACTTAGCG AAATCCGTTT AGGCCAACGT
ACCACCGTAT TTTGTAGTAT CTGCCAACCC CGCTAA
|
|---|
| Protein sequence | MPELPEVEVT RQGITPYLVD QTVVDLIVRN PSLRWPVPEL AKQIIGQTIR QVRRRAKYLL
IDTDAGTSIV HLGMSGSLRI LPHDTPVEKH DHIDLVLANG RILRFNDPRR FGAWLWCQLP
EEAHPLLEKL GPEPLTDAFN VNQLAASLAG KKKAIKLCLM DNHIVVGVGN IYANEALFAA
GIHPEAEAGK IDIERLTVLV AEVKQILAHA IKQGGTTLKD FTNADGKPGY FAQKLHVYGR
GGETCTQCGN LLSEIRLGQR TTVFCSICQP R
|
|---|
| |