| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4693 |
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| Symbol | |
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| ID | 1172274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4894620 |
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| End bp | 4895768 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637346399 |
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| Product | multidrug resistance protein AcrA/AcrE family |
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| Protein accession | NP_720209 |
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| Protein GI | 24376165 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGCAGA CAATTAAACT TGCCTCAGTA ATCAGCGTGG CGTTGTGGAT GGCAGCTTGT
AGCCCTCAAG AGGATAAAGC CGCTCATGGC GGCGCAGGGC CGCAGAGCAT GGAGGTTGGG
GTAATCAAAG TGGAGGCTAA GCCACAGGTT ATCAAAATCG AATTACCAGG CCGTAGCAAG
GCATTCCTTG AGGCCGAAGT TCGTCCTCAG GTAAATGGCA TTATCACTAA GCGCAGCTTT
GTTGAGGGAG GCAATGTTAA GCAGGGTGAA TCTCTCTATC AAATTGATTC TGCTACCTAT
AAAGCCGCAT TGGTGAGTGC AAACGCTGAC TTAGCACGCG CAAACGCAAG TCTAGCTTCG
GCTAAGGCAA AGGCCGCTCG CTATCAGCAA TTGGTGAAGA CTAACGCCAT CAGTAAACAA
GATTTTGATG AAGCAGATGC CGCTTATAAA GAAGCGTTGG CGAGCGTGAC TGTTGCGGAA
GCGGCGATCA ATACTGCAAA AATCAATCTA GAATACACCG AAGTATTGGC TCCTATTTCA
GGCCGTATTG GTAAATCCAG TGTGACCGCA GGTGCGCTGG TGACGGCAAA CCAAAGTCAA
ACCTTGGCGA CGATTCAGCA ACTTGACCCT ATTAATGTGG ATATCGCGCA ATCGAGTGCG
CAATTACTGC GCCTAAAAGC GAAATTAAAA CAGGGTAAAT TGTTGGCGGC TGACAATGCT
GATGTGCAGC TAGTTTTGGT AGATGGCACC GTCTACGGTC ATACCGGTAA ACTGCAATTT
GCTGAAGTGA GTGTGGATCA AAATACTGGT TCAGTCATTT TGCGTGCTGA ATTCCCGAAC
CCTGACGGGG TGTTGTTACC CGGTATGTAT GTTCGCGCTA TGTTGAATGC GGGAACTGAT
CCTCAGGCCA TTCTTGTGCC ACAGAAAGCT ATTACTCGTA ACGCTAAGGG CGAGGCTGTG
GCGATGGTGG TCAATGCGCA AGGCCAAGTA GAAGCCAAAA TTGTGACCAC TGCTGAGGTG
ATAAATCATC AGTGGCGGGT GACATCAGGT CTTGCCGTCG GTGATCAGGT TATTGTGGAA
GGATTGCAAA AAATCCGCCC AGGAGCGCCA GTCATTCCCA AAGTTATTTC AGCAACCCAA
GCACAATAG
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| Protein sequence | MRQTIKLASV ISVALWMAAC SPQEDKAAHG GAGPQSMEVG VIKVEAKPQV IKIELPGRSK
AFLEAEVRPQ VNGIITKRSF VEGGNVKQGE SLYQIDSATY KAALVSANAD LARANASLAS
AKAKAARYQQ LVKTNAISKQ DFDEADAAYK EALASVTVAE AAINTAKINL EYTEVLAPIS
GRIGKSSVTA GALVTANQSQ TLATIQQLDP INVDIAQSSA QLLRLKAKLK QGKLLAADNA
DVQLVLVDGT VYGHTGKLQF AEVSVDQNTG SVILRAEFPN PDGVLLPGMY VRAMLNAGTD
PQAILVPQKA ITRNAKGEAV AMVVNAQGQV EAKIVTTAEV INHQWRVTSG LAVGDQVIVE
GLQKIRPGAP VIPKVISATQ AQ
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