Gene SO_4687 details

Gene Information

• Locus tag: SO_4687
• Symbol: ugd
• ID: 1172269
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4886071
• End bp: 4887234
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637346394
• Product: UDP-glucose 6-dehydrogenase
• Protein accession: NP_720203
• Protein GI: 24376159
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1004] Predicted UDP-glucose 6-dehydrogenase
• TIGRFAM ID: [TIGR03026] nucleotide sugar dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATAG TTGTGGTTGG AATGGGCTAC GTTGGCCTAT CAAATGCGGT GTTGCTCGCG 
CAGCAAAACC AAGTGACTGC TATTGATCTG ATGCCTGAAC GTGTCAAATT AGTCAATGAC 
CGAAAATCAA CCGTCGCCGA CAACCTGATT GAAGAATACC TGCGCAATAG CGCCTTAAAT 
CTACGTGCCA CGATGGACAA AAACGCAGTC AAAGACGCCG ATTTTGTCAT AATAGCCACC 
CCGACTGACT ATGATCCGCA AACCAACTAC TTTAATACTC AATCGGTAGA AAATGTCGCT 
AAGGAAGTCC TCTCCCTGAA TCCTGACACG ACGATTATTA TTAAATCGAC TGTACCCGTT 
GGCTTTACTG CGAGTTTGAG AACCAGATTA AATAGCGATA ACATCCTGTT CTCACCCGAA 
TTTTTACGCG AAGGCCAAGC ACTTTACGAT AACCTTCACC CCTCCCGTAT CATTGTGGGT 
GAGCGTTCAG CTCGCGCCCA AACCTTTGCG ACCCTTCTTG TTAATGCGGC GATTAAACAA 
GATATTCCGA TTTTGCTCAC CGACAGCACC GAAGCTGAGG CAATTAAGTT ATTTGCCAAT 
ACCTTTTTAG CCATGCGCGT CGCCTATTTT AATGAGTTGG ACACCTATGC CGAGAGCCGA 
GGACTCAATA CGCGCCAAAT TATCGAGGGT GTATGTCTCG ATCCTCGCAT CGGTGATTAC 
TACAACAATC CTTCCTTTGG TTATGGTGGT TATTGTCTGC CAAAGGATAC TAAGCAATTA 
CTCGCAAACT ATAACGATGT GCCCAACAAC CTGATCAGCG CCATTGTCGA TTCCAACACC 
ACTCGTAAAG ATTTTATTGC CGATGCCATT ATCAGTAAGC AGCCTAAGCG AGTGGGGATT 
TACCGACTGA TCATGAAGTC AGAGTCGGAC AACTTCCGTG CCTCTGCGGT GCAAGGCGTG 
ATGAAACGCA TTAAAGCCAA AGGTATTGAA GTCGTGGTCT ATGAACCCGT CCTCAAGGAA 
AGCGAATTCT TTAAATCAAC CGTTATCCGC AATTTAGAAG AATTTAAAGC CATGTGCGAT 
GTTATCGTTA CAAATCGCAT GACCAGTGAA CTCGAAGATG TTGCCGATAA GGTTTACACT 
CGAGATCTGT TCCACCACGA CTAA 

 

Protein sequence

MNIVVVGMGY VGLSNAVLLA QQNQVTAIDL MPERVKLVND RKSTVADNLI EEYLRNSALN 
LRATMDKNAV KDADFVIIAT PTDYDPQTNY FNTQSVENVA KEVLSLNPDT TIIIKSTVPV 
GFTASLRTRL NSDNILFSPE FLREGQALYD NLHPSRIIVG ERSARAQTFA TLLVNAAIKQ 
DIPILLTDST EAEAIKLFAN TFLAMRVAYF NELDTYAESR GLNTRQIIEG VCLDPRIGDY 
YNNPSFGYGG YCLPKDTKQL LANYNDVPNN LISAIVDSNT TRKDFIADAI ISKQPKRVGI 
YRLIMKSESD NFRASAVQGV MKRIKAKGIE VVVYEPVLKE SEFFKSTVIR NLEEFKAMCD 
VIVTNRMTSE LEDVADKVYT RDLFHHD