Gene SO_4673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4673 
Symboltdh 
ID1172255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4870953 
End bp4871978 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content49% 
IMG OID637346380 
ProductL-threonine 3-dehydrogenase 
Protein accessionNP_720188 
Protein GI24376145 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAC TAAGCAAGTT AAAAGCCGAA AAAGGCATTT GGTTAGTCGA TGCGCCTAAG 
CCTGAAATGG GCCATAACGA TCTACTGATC AAGATTAAAA AGACCGCCAT TTGCGGCACC 
GACATGCACA TCTACAACTG GGACGAATGG TCACAAAAAA CCATTCCTGT GCCTATGGTG 
GTAGGTCACG AGTATGTGGG AGAAGTGGTT GATATCGGGC AAGAAGTTCG CGGCTTTAAC 
ATTGGTGACC GTGTTTCTGG CGAAGGCCAT ATCACCTGCG GCCACTGCCG TAACTGCCGC 
GCGGGTCGCA CCCACTTATG CCGTAACACC TCAGGTGTGG GTGTAAACCG CGAAGGTTCA 
TTTGCCGAAT ACTTAGTGAT CCCAGCGTTT AACGCCTTCA AAATCCCCGA TGATATCAGC 
GACGATTTAG CCTCTATCTT TGATCCATTC GGTAACGCAG TACACACGGC ACTGTCATTC 
GACTTAGTGG GCGAAGATGT GTTGATTACT GGCGCGGGTC CTATCGGTAT TATGGCTGCG 
GCCGTATGTC GCCACGTTGG TGCGCGCCAT GTAGTGATCA CCGACGTTAA CGAATACCGT 
TTAGAACTGG CCCGTAAAAT GGGTGCCACA CGTGCCGTAA ACGTTGCTCA AGAAAACCTC 
AAAGACGTGA TGAAAGAACT CGGCATGACC GAAGGGTTTG ACGTCGGCTT AGAAATGTCT 
GGCGTACCTT CTGCCTTCCG TGCCATGTTA GATACCATGA ACCACGGTGG CAAAATCGCG 
ATGCTCGGTA TTCCGGGTGG CGAAATGGCC ATTGATTGGA GCAAAGTGAT CTTCAAAGGT 
TTGGTCATTA AAGGCATTTA CGGTCGTGAA ATGTTCGAAA CCTGGTACAA GATGGCAAGC 
CTTATCCAAT CTGGCTTAGA TATTTCGCCC ATCATTACCC ATCACTACAA AATTGATGAT 
TTCCAAAAAG GCTTCGACGC TATGGGCTCG GGCCAATCGG GTAAAGTCAT CCTCAGCTGG 
GATTAA
 
Protein sequence
MKALSKLKAE KGIWLVDAPK PEMGHNDLLI KIKKTAICGT DMHIYNWDEW SQKTIPVPMV 
VGHEYVGEVV DIGQEVRGFN IGDRVSGEGH ITCGHCRNCR AGRTHLCRNT SGVGVNREGS 
FAEYLVIPAF NAFKIPDDIS DDLASIFDPF GNAVHTALSF DLVGEDVLIT GAGPIGIMAA 
AVCRHVGARH VVITDVNEYR LELARKMGAT RAVNVAQENL KDVMKELGMT EGFDVGLEMS 
GVPSAFRAML DTMNHGGKIA MLGIPGGEMA IDWSKVIFKG LVIKGIYGRE MFETWYKMAS 
LIQSGLDISP IITHHYKIDD FQKGFDAMGS GQSGKVILSW D