| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4660 |
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| Symbol | |
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| ID | 1172244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4859473 |
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| End bp | 4860192 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637346369 |
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| Product | transglycosylase SLT domain-containing protein |
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| Protein accession | NP_720175 |
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| Protein GI | 24376132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAG CGCACCAACC GCCAATTTAC CTTAAGTCGA TTGCCCTATT GTGGCTGGGT
TTATTGTTGG CTTGGGGAAG TCTTGCAACC GTGTTTGCTG AAGAGGCAAA GCCTAAACCC
CGCATTGTGG CGCGCTATTC CGACACTGGC ATCATGAGCA GTGAAGGCCA AGAAAAATTC
AAGGTTTATC AATATCAACA GGCCAATGGT GTCACAGTTT TTACCGATAA GGCACCAACG
AGCACTGACT ATCAGATCTT GCTGTACGAG TGCTTTGCTT GCCGCCCAGA CTCCGATATC
GACTGGAATG GCATTCGGTT ATTTACCCGT AATTATGATA GTTTAATCAG CCGCGCCGCC
GATAAACATC AATTAGATCC TGCACTTATC CGTGCAGTTA TCCATGCAGA ATCAGCATTT
AACGCCAGAG CTGTGTCCCG CGCTGGTGCA ATGGGGCTGA TGCAACTGAT GCCTGAAACC
GCAAAAGATA TGGGAGTAAC TAATGCTTTT TTGCCGGAAG AGAATATTTT AGGTGGCAGT
AAGTATTTGG CGCAAATGCT AAAACAGTTC AATGGGGATA TTGCGTTGGC CTGCGCGGCC
TATAATGCTG GGCCGACAAC TGTGACCCAA TATAATGGCA TTCCGCCCTA TCCAGAAACC
CAGGCCTATG TGGAACGGGT GCAAATTCTG CTCAAGCGTT ACCGTGACAC CAAGGTTTAG
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| Protein sequence | MIAAHQPPIY LKSIALLWLG LLLAWGSLAT VFAEEAKPKP RIVARYSDTG IMSSEGQEKF
KVYQYQQANG VTVFTDKAPT STDYQILLYE CFACRPDSDI DWNGIRLFTR NYDSLISRAA
DKHQLDPALI RAVIHAESAF NARAVSRAGA MGLMQLMPET AKDMGVTNAF LPEENILGGS
KYLAQMLKQF NGDIALACAA YNAGPTTVTQ YNGIPPYPET QAYVERVQIL LKRYRDTKV
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