| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4654 |
|---|
| Symbol | cysW-2 |
|---|
| ID | 1172236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 4849923 |
|---|
| End bp | 4850774 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637346362 |
|---|
| Product | sulfate ABC transporter, permease protein |
|---|
| Protein accession | NP_720170 |
|---|
| Protein GI | 24376127 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4208] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGT TATCTCCGGC AACCAACCAC GCCACCACAG AAGCACCTTG GATAAAGTGG
AGTTTGATTG GCCTTGCGTT AAGTTTTCTC GCGTTATTTT TAGTTCTACC TTTAGCGGTC
GTACTCTACG GTGCTTTCGA GGCTGGTATT AATGTTTGGT GGCAAGCAAT CACAGATCCT
GACGCGCTTG CGGCCATTCG CTTAACGTTA CTGGTATTAA TTATTGTTGT ACCAACCAAT
GCCATTTTCG GCGTAGCAAT TGCTTGGGCT ATTGCTAAAT TTGAGTTTAG GGGAAAAACC
TTACTAATCT CGATTATTGA TATGCCCTTT GCCATCTCAC CTGTCGTCGT GGGATTGATT
TTCGTGATCC TCTTCGGTGC CCAAGGATGG TTTGGACCTT GGCTCGCGGC CCATGATTTA
AAGGTCATAT TTGCCGTCCC AGGAATCATC ATTGTCATCA TGTTTGGCAC TTTACCCTTC
GTGGCGCGCG AATTGATCCC ACTGATGCAA CAACAGGGCA AAGATGAGGA AGAAGCCTCG
CTAACCTTAG GCGCCAATGG TTTGAAAACC TTCTGGTACG TCACGCTACC AAATATTAAA
TGGGGCTTAC TCTACGGCGT GATCCTCTGT AATGCCCGTG CGATGGGCGA GTTTGGCGCG
GTCGCTGTGG TGTCAGGTCG CATTCGCGGT GAGACGAATA CTATGCCGCT ACATATAGAA
GTGCTCTACA ACGAATACAT GTTTACAGCC GCGTTTGCAG TATCGTCACT ACTCACAGGC
TTAGCACTGG TAACTATCGT GCTCAAAAGC ATGGTGGAGT GGAAAGATGA ACGTAAACAT
AAAACCAACT AA
|
|---|
| Protein sequence | MNTLSPATNH ATTEAPWIKW SLIGLALSFL ALFLVLPLAV VLYGAFEAGI NVWWQAITDP
DALAAIRLTL LVLIIVVPTN AIFGVAIAWA IAKFEFRGKT LLISIIDMPF AISPVVVGLI
FVILFGAQGW FGPWLAAHDL KVIFAVPGII IVIMFGTLPF VARELIPLMQ QQGKDEEEAS
LTLGANGLKT FWYVTLPNIK WGLLYGVILC NARAMGEFGA VAVVSGRIRG ETNTMPLHIE
VLYNEYMFTA AFAVSSLLTG LALVTIVLKS MVEWKDERKH KTN
|
|---|
| |