| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4625 |
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| Symbol | comF |
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| ID | 1172208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4820646 |
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| End bp | 4821353 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637346334 |
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| Product | competence protein ComF |
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| Protein accession | NP_720141 |
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| Protein GI | 24376098 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCGGGCA GTTTACCTAA CCGCTGCTTA CTGTGCCACC AATCCCTAAA TTCAACGGAA
GCTGGATTTT GCCATGTGTG CTTACACTCA GGGCTTTACC ATAGCCCAAT CTGTTTAGGT
TGTGGCAAAT CCATGCAGCT TGAACTCGAG TATTGCGGTG AATGCCAAAA GCATCAGCCG
CGAAAAGTCA TTGCGCCCTG TAGCTACCAT CAAGGATTTG GCCCATGGAT CGCGGCGATC
AAATATCAAG GCCAATTCGC CGCGCTGCCC ATTTTATGCC ACGCCTTAGT TGAGAGGCTT
TCCTTACTTG AGCAGCAAGG GTTGATCACG CTGCCGCAGG CCATAGTACC GGTACCGCTT
CATGCCAATC GGCTTCGGCA ACGGGGATTT AATCAAGCAT GGCTGATTGC CCATGAGTTA
TCGCAACGCT TACAGTTGCC CTTAGTTGAC CAAGGATTAA CCCGGCGGCA GGATACGCGT
CCACAGGCTG GATTAAACGG CGTTCAGCGG CGGCGAAATC TACAGGATGC TTTTGAATTA
AATGTTGATT TTGCCTATCA ACGTATCGCG CTGGTGGATG ATGTGGTGAC TACAGGCACG
ACGGTTGCGG AAATCGCCCG TTTATTTGAA GCGCGATACG TGCATGTTCA AATATGGTGC
CTTGCACGAG CCGAAGCGCC AGGCTTGTTG GAGATAACGG ACTTATAG
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| Protein sequence | MAGSLPNRCL LCHQSLNSTE AGFCHVCLHS GLYHSPICLG CGKSMQLELE YCGECQKHQP
RKVIAPCSYH QGFGPWIAAI KYQGQFAALP ILCHALVERL SLLEQQGLIT LPQAIVPVPL
HANRLRQRGF NQAWLIAHEL SQRLQLPLVD QGLTRRQDTR PQAGLNGVQR RRNLQDAFEL
NVDFAYQRIA LVDDVVTTGT TVAEIARLFE ARYVHVQIWC LARAEAPGLL EITDL
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