| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4620 |
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| Symbol | ifcA-2 |
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| ID | 1172203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4815040 |
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| End bp | 4816788 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637346329 |
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| Product | fumarate reductase, flavoprotein subunit precursor |
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| Protein accession | NP_720136 |
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| Protein GI | 24376093 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG3976] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTATA AAAAATCCAT TATTGGTATT GCTGTTACGG CAACAGCAAT TATTGCAGGC
TGTCAAGTTA CCCATCAAAT AGTAAAAAGC CAGGGAACCG CTCAAGGCAA GCATGGCGAA
GTGCAGGTTG AAACTACATT TAAAGACGGA CATATTGTTG CGATTGATGT ACTCAAGCAA
AAGGAAAATA AAGTCCTTGC TGGTGCCGTA TTTAAAGATG TTAAACAGGC AATTATTGAT
AATAACTCTA TCGAGGTTGA CGGTATTGCT GGCGCCACCG TAACGTCTAA AGCGCTTAAA
GAAGCCGTGG GTAAAAGTAT TGAAGCCGCG GGAGTTACTC TTGTTGCAAC GGCTTCTGCT
AAGAAAAGTG AGGCGTTAAC CCCAGCAGAA TATACCTATG ATGTGGTGAT TATTGGCTCG
GGTGGAGCAG GTTTTAGCGC GGGTTTAGAG GCGATAGCCG CAGGTCGCTC TGCCGTTATT
ATTGAAAAGA TGCCAATTAT TGGTGGTAAC TCATTGATCT CTGGCGCTGA GATGAATGTG
GCCGGTAGTT GGGTGCAAAA AAATATGGGA ATTACCGATA GCAAAGAGCT GTTTATCAGC
GACACGCTAA AAGGTGGCGA TTTCAAAGGT GATCCTGAAA TGGTTAAAAC CATGGTCGAT
AATGCCGTCG GTGCAGCAGA ATGGCTAAGG GATTACGTCA AAGTAGAATT CTACCCAGAT
CAATTATTTC AGTTTGGTGG GCACAGCGTT AAACGGGCAT TAATCCCTAA AGGTCATACT
GGGGCTGAGG TCATTAGTAA GTTTTCGATT AAAGCTGATG AAGTCGGTTT ACCGATCCAT
ACCAATACTA AGGCTGAAAA GTTAATCCAA GATCAAACGG GTCGCATTGT GGGTGTAGAA
GCGGCACATA ATGGCAAAAC CATCACTTAC CATGCTAAAC GCGGTGTTGT GATTGCGACG
GGTGGTTTCT CCTCTAATAT GGAGATGCGC AAGAAATACA ATCCAGAGCT AGACGAGCGC
TACGGTAGTA CAGGCCATGC GGGCGGCACC GGTGATGGTA TTGTGATGGC AGAGAAAATT
CACGCAGCGG CTAAAAATAT GGGATATATC CAGTCATATC CTATTTGTAG CCCAACCTCG
GGCGCGATTG CCTTAATTGC AGACTCTCGC TTTTTTGGTG CAGTGTTAAT TAACCAGAAG
GGTGAGCGTT TTGTTGAGGA ATTGGAACGC CGAGATGTGA TTTCACATGC CATTCTAGCC
CAGCCTGGTC GCTATACTTA TGTGCTCTGG AATCAAGACA TTGAAAACGT TGCTCATACA
GTTGAAATGC ATCAAGGCGA ACTGAAGGAA TTCACCAAAG ACGGACTAAT GTATAAGGTC
GACACCCTAG AAGAAGCCGC TAAAGTCTTT AATATTCCTG AAGATAAGCT GTTATCAACG
ATTAAAGACG TTAATCACTA TGCAGCTACA GGAAAGGATG AGGCCTTTAA TCATCGCTCA
GGATTAGTCG ATTTAAGTAA AGGACCTTAT TGGATTTTAA AAGCGACACC TTCTGTGCAC
CATACGATGG GCGGCCTTGT GGTGGATACA CGTACTCGTG TACTGGATGA ACAAGGAAAG
GTGATTCCGG GCTTGTTTGC TGCGGGTGAA GTGACTGGTT TAACCCATGG AACCAATCGC
CTCGGTGGCA ATGCGTATAC AGATATCATT GTTTATGGCC GTATCGCAGG ACAAGAAGCC
GCAAAATAA
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| Protein sequence | MHYKKSIIGI AVTATAIIAG CQVTHQIVKS QGTAQGKHGE VQVETTFKDG HIVAIDVLKQ
KENKVLAGAV FKDVKQAIID NNSIEVDGIA GATVTSKALK EAVGKSIEAA GVTLVATASA
KKSEALTPAE YTYDVVIIGS GGAGFSAGLE AIAAGRSAVI IEKMPIIGGN SLISGAEMNV
AGSWVQKNMG ITDSKELFIS DTLKGGDFKG DPEMVKTMVD NAVGAAEWLR DYVKVEFYPD
QLFQFGGHSV KRALIPKGHT GAEVISKFSI KADEVGLPIH TNTKAEKLIQ DQTGRIVGVE
AAHNGKTITY HAKRGVVIAT GGFSSNMEMR KKYNPELDER YGSTGHAGGT GDGIVMAEKI
HAAAKNMGYI QSYPICSPTS GAIALIADSR FFGAVLINQK GERFVEELER RDVISHAILA
QPGRYTYVLW NQDIENVAHT VEMHQGELKE FTKDGLMYKV DTLEEAAKVF NIPEDKLLST
IKDVNHYAAT GKDEAFNHRS GLVDLSKGPY WILKATPSVH HTMGGLVVDT RTRVLDEQGK
VIPGLFAAGE VTGLTHGTNR LGGNAYTDII VYGRIAGQEA AK
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