Gene SO_4615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4615 
Symbol 
ID1172198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4809010 
End bp4809651 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID637346324 
ProductSCO1/SenC family protein 
Protein accessionNP_720131 
Protein GI24376088 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA GAATCCCCAA CACGCTGTTA GTGATCGCCA TACTCTTGAT AGGGCTCGGA 
GGGCTATTTT CGGTGAAGTT CACCCCGCCT AAACCCGTCG AATTACAAAG TGGTTTTATG 
TTTCCTGAAG CGTTTGCTCT CGCGCCATTT GAGCTTGTTG ATCAACATAA ACAGGCTTTT 
ACCAATGCTA ATTTAACAGA CCAGTGGAGC TTATTTTTTA TCGGTTTTAC CTACTGCCCC 
GATATATGCC CAACAACCTT AAACAAGCTT GCCGCCGCTT ACCATGAGCT AAAAAAAATT 
GCGCCAATTC AGGTGGTATT TTTATCTGTC GATCCTAAAC GGGACACGCC AGATAAGCTG 
CTTAGCTATG TGAATTTCTT TAATCCTGAG TTTAAGGCTA TCACGGGTAA GCAAACCCAA 
ATCTTCCCAC TCACCCGCAG TTTAGGATTC ACCTATGCAA TGGTCGGTGA AGGTGAAAAT 
TATCAAGTCG ACCATAGTGC TGGCTATGTG CTGGTGTCTC CCCAAGGCAC GCGGGTGGCG 
GTTTTTAAAC CCACAGCGGC GTTAGGTCAA GCCCCTCAAG TTCTCAACGA AGCCTTGATC 
AGTGACTTCG CTAAAATCGT TAACAGCTAT AAACCGCAGT GA
 
Protein sequence
MQKRIPNTLL VIAILLIGLG GLFSVKFTPP KPVELQSGFM FPEAFALAPF ELVDQHKQAF 
TNANLTDQWS LFFIGFTYCP DICPTTLNKL AAAYHELKKI APIQVVFLSV DPKRDTPDKL 
LSYVNFFNPE FKAITGKQTQ IFPLTRSLGF TYAMVGEGEN YQVDHSAGYV LVSPQGTRVA 
VFKPTAALGQ APQVLNEALI SDFAKIVNSY KPQ