| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4614 |
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| Symbol | ctaB |
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| ID | 1172197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4808057 |
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| End bp | 4808959 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637346323 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | NP_720130 |
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| Protein GI | 24376087 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC CACTCTCAAT CAGCAGTCAG CCTAGTGTTA ATGTGGCATG GCGCGACTAT
TTCGAAATGA CTAAGCCCAA GGTGGTAGCC TTAATGCTAC TCACGGTCTT AGTTGGCATG
TGCTTGGCGA TGCCAACGAT ATTACCCGTA CAACCTTTGA TCGCAGGACT TTTAGGCATC
GCGATGATGG CGGGCTCGGC TGCGGCATTA AATCATCTGA TTGATCGACG CATCGATGGC
TTAATGGCGC GCACTTACAA TCGCCCTCTC CCAAAAGGGC GAATCTCGGC AACGCGGGCG
CTAATATTTG CCGCAGCCTT AGGCAGCCTT GGTTTTGTCA TTCTGTATGT TTTCACTAAC
CCGCTCACCG CTTGGCTCAC CTTTGCCAGC CTAATAGGTT ATGCCTTGAT TTATACCGCC
TATTTAAAAC GAGCCACACC CCAAAACATC GTGATTGGCG GCTTAGCGGG TGCTATGCCG
CCGCTGCTTG GTTGGACTGC CGTCACTAAT CAATTCCATG GTCATGCGCT ATTGCTGGTG
ATCATCATCT TCCTGTGGAC GCCACCGCAT TTTTGGGCAC TGGCGATTCA TAGACGCGCT
GAATATGCCA AAGTGGATAT TCCCATGCTG CCCGTCACCC ATGGGGTAGA GTTTACTAAA
ACCTGTATTT TGCTCTATAC GATTTTGCTG GCGATTGCTT GCCTATTACC CGTCTTGGTG
GGGATGAGTG GCCCACTGTA TTTCGTCTGC TCTAGTGCGC TCAGTTGTGG CTTTATCTAT
AAGGCGTGGC AATTAAAGTA TCAGGATCAC GAAGGACTGG CGATGCAGGT GTTTCGCTTC
TCGATTTATC ATTTAATGTT GTTATTTATG GCATTACTGC TCGACCACTA TCTGTGGGCC
TAA
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| Protein sequence | MAKPLSISSQ PSVNVAWRDY FEMTKPKVVA LMLLTVLVGM CLAMPTILPV QPLIAGLLGI
AMMAGSAAAL NHLIDRRIDG LMARTYNRPL PKGRISATRA LIFAAALGSL GFVILYVFTN
PLTAWLTFAS LIGYALIYTA YLKRATPQNI VIGGLAGAMP PLLGWTAVTN QFHGHALLLV
IIIFLWTPPH FWALAIHRRA EYAKVDIPML PVTHGVEFTK TCILLYTILL AIACLLPVLV
GMSGPLYFVC SSALSCGFIY KAWQLKYQDH EGLAMQVFRF SIYHLMLLFM ALLLDHYLWA
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