| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4556 |
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| Symbol | |
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| ID | 1172142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4752399 |
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| End bp | 4753364 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637346268 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_720073 |
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| Protein GI | 24376030 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTCG ATAACTTAGC CAGAATTGAT CTCAACCTGC TGGTGATATT AAAAGTTTTA
CTTGAAGAAC AAAGTGTTAC CCGCGCAGCA AGTCGTTTGC ATATTAGTCA ATCTGCGCTG
AGTAAGAGCT TGAATCGCCT GCGAGACACC TTAGATGATC CCCTGTTCCA ACGCACAGCC
CACGGGCTAA AACCCACAGC CCATGCGCTC AATATAGGGC AAAAGCTGCC TAATATTTTG
CAGGATTTAT ATCAACTTAC CCAACCGCCA ACCTTCAATC CGGCTAGTAG TAACAGGCAG
TTTTCCTTTG CCATGGTCGA AAGCGCCTAT GAAACACTGA TACCCTATTT TATTGGCCCA
TTATTGAATA CCGCGCCCAA TATAAAGCTC GACTCTTATG TCTGGACCGA AAAATCCATG
CATGACTTAC AGCAAGGGCA AATTGACTTT GGGATTTCAG GACGAGATCT ACATCCGCTC
TCAGATTCAC ACACAGATCG CCTGCCCGAA GGTATTGCTT GCCAAACTCT GTTTACCGAC
ACACAAGTAT GTTTAGTTCG CCAAGATCAT CCACTGATGG CAGCACTCAA CTCGCCCCAG
TGGAATTTAT CCTTGTATTT GGATATGGCG CATGTGCAGG TTCGCTGCGA AGGGAGTGAT
TGGTGGGCAC TAGACTATTT TCTTGCTGAT CGCAGCCACA GGCGCCAAAT TAGCACCACA
GTTCCGGATT TTTACGGTGC GGCCAGTGTC TGCGCCCACA GTGACTTGAT ATTTACCTTG
CCTTCAAGCT TTGCTCTGCA CGCCTGCAAG CTATACCCAC TGAAACTATT GCCTTTACCC
TTTGAGTTTA TGCCCATGGC TTATGTGCTC TTGTGGCATC AACGCAACGA TGAAGATCAA
GGTCATAAAT GGATGCGCGA CACCATTTGC CAAAGCGTTG AAAAACTGAT ACTGCCGCAG
AGTTAA
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| Protein sequence | MNLDNLARID LNLLVILKVL LEEQSVTRAA SRLHISQSAL SKSLNRLRDT LDDPLFQRTA
HGLKPTAHAL NIGQKLPNIL QDLYQLTQPP TFNPASSNRQ FSFAMVESAY ETLIPYFIGP
LLNTAPNIKL DSYVWTEKSM HDLQQGQIDF GISGRDLHPL SDSHTDRLPE GIACQTLFTD
TQVCLVRQDH PLMAALNSPQ WNLSLYLDMA HVQVRCEGSD WWALDYFLAD RSHRRQISTT
VPDFYGAASV CAHSDLIFTL PSSFALHACK LYPLKLLPLP FEFMPMAYVL LWHQRNDEDQ
GHKWMRDTIC QSVEKLILPQ S
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