Gene SO_4502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4502 
Symbol 
ID1172094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4694289 
End bp4695194 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content48% 
IMG OID637346222 
Producthypothetical protein 
Protein accessionNP_720022 
Protein GI24375979 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1910] Periplasmic molybdate-binding protein/domain 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCCG CAAGTGAATT GATTTACATG AGCGCTAAGC AGGTTGCTGA GTATTTGGAT 
CTTAATGAGA AGAAAGTCTA CGCGATGGCG AACGACCGGA TTTTGCCAGC AACTAAGATC
ACAGGTAAAT GGTTATTCCC TAAGGTACTG ATTGATCGTT GGGTGATGGA TTCCTGCCAC
AGCGGCATGT TAACTGACCG ACTATTGATC ACCGGTAGTG ACGATCCTTT GCTGTCTATG
TTAGTGGCTC GCTTAATGGC GCAGGTCGGT AGTCGCGAGC TGATCAGCTA CAGTGCCACT
GGTTCACGTT TGGGGTTGGA GTTATTGGCA AAGGGCTATG CTGACGTGTG TACTTTGCAC
TGGGGGAGTA TGGAAGATAG AAATATCCGT CATCCGGCGC TGCTTAAAGG TTATAACAAT
CATCAACAAT GGATAATGGT TCATGGTTAC TCCCGTCAAC AAGGCTTGAT CATGCGTCCC
GATATGCACC ACGGATGCCA AGAAGAGGAT AAAGTCCTCA CCTTGCCGTG GCGCTGGGTG
AGTCGCCAAG GCGGTGCGGG GAGTCAGCAA CATTTAGAAC AGTGGTTATT AAAGCATGGG
GCACGTTTAG ATCAGCTCAA TGTTGTGCTC ACTGCTTATA GCGAGCGCGA GCTCGCTGGC
TATATTGCTC GCGGAGATGC CGATATTGGT TTTGGTTGTC AGTCTGTTGC TTTAGAGAGT
GGTTTAAGTT TTGTTCCACT GATAAAGGAG TCCTTCGACT TTGTTATGCC GCAAAGTATT
TACTTCCGCA GGCAACTACA ACAGTTGTTT ACTATGTTAA GTAGTGGACA TACGCGGCAA
ATGGCGGCCC TTTTAGGAGG GTATGATCTT ACCGATTGTG GACAGCTTCT GTGGAGTGCA
AGTTAA
 
Protein sequence
MTSASELIYM SAKQVAEYLD LNEKKVYAMA NDRILPATKI TGKWLFPKVL IDRWVMDSCH 
SGMLTDRLLI TGSDDPLLSM LVARLMAQVG SRELISYSAT GSRLGLELLA KGYADVCTLH
WGSMEDRNIR HPALLKGYNN HQQWIMVHGY SRQQGLIMRP DMHHGCQEED KVLTLPWRWV
SRQGGAGSQQ HLEQWLLKHG ARLDQLNVVL TAYSERELAG YIARGDADIG FGCQSVALES
GLSFVPLIKE SFDFVMPQSI YFRRQLQQLF TMLSSGHTRQ MAALLGGYDL TDCGQLLWSA
S