| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4472 |
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| Symbol | ntrC |
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| ID | 1172066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4660676 |
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| End bp | 4662091 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637346187 |
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| Product | nitrogen regulation protein NR(I) |
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| Protein accession | NP_719993 |
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| Protein GI | 24375950 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATCA GTGAACAAGT GTGGATCCTC GACGATGACA GCTCAATACG TTGGGTGCTC
GAAAAAGCGC TCCAAGGCGC TAAACTTAGC ACCGCCAGCT TTGCCGCAGC AGAATCACTC
TGGCAAGCAT TAGAGATTTC CCAGCCACGG GTCATCGTCT CGGATATTCG TATGCCGGGA
ACCGATGGCT TAACTCTGCT TGAAAGACTA CAAATCCACT ATCCGCATAT TCCCGTTATC
ATCATGACGG CGCATTCGGA CTTAGACAGT GCCGTGAGTG CCTATCAAGC TGGGGCGTTT
GAGTATTTGC CAAAACCCTT TGATATTGAT GAGGCAATTT CCCTCGTTGA GCGCGCTCTG
ACCCATGCAA CAGAGCAAAG TCCAACGCCA GTTGCGCAGG AAACTCAAGT CAAAACCCCT
GAAATCATCG GTGAAGCGCC CGCCATGCAG GAAGTGTTTC GCGCCATCGG CAGGCTGTCG
CGCTCTTCAA TCAGCGTACT GATCAATGGC CAATCAGGCA CAGGTAAAGA GCTGGTTGCA
GGCGCACTGC ATAAGCACAG TCCGCGCAAG GATAAACCTT TTATCGCCTT GAATATGGCG
GCGATTCCTA AGGATTTAAT CGAATCCGAA CTATTCGGCC ATGAAAAAGG CGCCTTTACT
GGTGCGGCCA ATGTGCGCCA AGGACGCTTC GAGCAAGCCA ATGGTGGCAC CCTGTTTTTA
GATGAAATCG GCGATATGCC ACTGGACGTG CAAACCCGTT TACTGCGCGT ACTTGCCGAT
GGGCAGTTTT ATCGCGTCGG CGGCCATAGT GCTGTTCAAG TGGATGTACG GATTATTGCT
GCCACCCACC AAGACCTAGA GCAATTAGTG TTGAAAGGCG GATTTAGGGA AGACTTATTC
CATCGCCTCA ATGTGATTCG TATCCACTTG CCACCGCTGT CACAACGCCG TGAGGACATA
CCACAGCTTG CAAGCCACTT TTTAGCCTCT GCCGCCAAGG AGATTGGTGT CGAAGCCAAA
ATCCTCACCA AAGAGACCGC AGCTAAACTG TCACAACTGC CATGGCCGGG TAACGTCAGG
CAGCTCGAGA ACACTTGTCG CTGGCTTACC GTCATGGCCT CAGGACAAGA AATTCTCCCC
CAAGACTTGC CGCCAGAATT ACTTAAGGAA CCTACCAGTA TCAATCCAAT GGCGAAAGGC
AGCCAAGATT GGCAATCGGC ACTCACCGAG TGGATCGACC AAAAACTGTC CGAAGGAAAT
AGTGATTTAT TAACCGAAGT GCAGCCCGCT TTTGAGCGTA TTTTGCTTGA AACTGCATTG
CGCCATACGC AAGGGCATAA ACAAGAAGCG GCAAAACGTT TGGGCTGGGG ACGAAATACA
CTGACACGAA AATTGAAAGA ATTATCGATG GATTAA
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| Protein sequence | MRISEQVWIL DDDSSIRWVL EKALQGAKLS TASFAAAESL WQALEISQPR VIVSDIRMPG
TDGLTLLERL QIHYPHIPVI IMTAHSDLDS AVSAYQAGAF EYLPKPFDID EAISLVERAL
THATEQSPTP VAQETQVKTP EIIGEAPAMQ EVFRAIGRLS RSSISVLING QSGTGKELVA
GALHKHSPRK DKPFIALNMA AIPKDLIESE LFGHEKGAFT GAANVRQGRF EQANGGTLFL
DEIGDMPLDV QTRLLRVLAD GQFYRVGGHS AVQVDVRIIA ATHQDLEQLV LKGGFREDLF
HRLNVIRIHL PPLSQRREDI PQLASHFLAS AAKEIGVEAK ILTKETAAKL SQLPWPGNVR
QLENTCRWLT VMASGQEILP QDLPPELLKE PTSINPMAKG SQDWQSALTE WIDQKLSEGN
SDLLTEVQPA FERILLETAL RHTQGHKQEA AKRLGWGRNT LTRKLKELSM D
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