Gene SO_4444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4444 
Symbol 
ID1172041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4632035 
End bp4632673 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content36% 
IMG OID637346162 
Productcapsular synthesis regulator component B, putative 
Protein accessionNP_719965 
Protein GI24375922 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTA AGATCATCCT TGCCGACGAT CACCCTATTA TACTCACTGG CGTGCGTAGT 
TTGATGGCTG AAATGCAGCC AAGTTGTGAC ATTGTTGCTG AAGCAAATAA TGTTTCCGAA 
TTATGGCGTA CATTAGAACA ACATGAATGT GACTTATTGA TCACAGACTT TAGTATGCCT 
AATGATGACA ATGTCGATGG TATGGCCATG ATTAAACAGC TAAGACGAAA ATATCCAAAC 
TTACCCATAA TAGTGTTGAC TCAAGTACAT AATTTAGGTG TATTACAAGC GCTGTTACAG 
ATTGGGATAC AAGGCTTGTT ATTAAAAAAA TCAGTTATTG CCGAATTAGA GAAAACAGTT 
AAAAAAGTAT TATTAGGTTC TGTTTACATT GGCGAAACTG TCCATGAATT ATTAAATGAA 
CAAGGTATTA ATCAATATGC CATCCCAGTT GAACTTTCAC TGAAAGAAAT AGAAGTGGTA 
CGTTTACTGG CAAATGGCAT GTCAGTGACT CAAGTTGCCA GTTATTTAAA TCGTAGTGTA 
AAAACCATTA GCACCCAAAA AACCAATGCA ATGCAAAAAC TCGGTTTAAA GAGTGACAGT 
GAGTTGTTTC ATTATGCACA GCAACAGGGC TTATTCTAA
 
Protein sequence
MAFKIILADD HPIILTGVRS LMAEMQPSCD IVAEANNVSE LWRTLEQHEC DLLITDFSMP 
NDDNVDGMAM IKQLRRKYPN LPIIVLTQVH NLGVLQALLQ IGIQGLLLKK SVIAELEKTV 
KKVLLGSVYI GETVHELLNE QGINQYAIPV ELSLKEIEVV RLLANGMSVT QVASYLNRSV 
KTISTQKTNA MQKLGLKSDS ELFHYAQQQG LF