| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4423.1 |
|---|
| Symbol | |
|---|
| ID | 1172020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 4613041 |
|---|
| End bp | 4614039 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637346142 |
|---|
| Product | ferric aerobactin receptor |
|---|
| Protein accession | NP_783543 |
|---|
| Protein GI | 28275288 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCA AAACCTCGTT TGTTGCTCTC GCTGTCCTTA CAGCACTCAC CCAATCCGCT
ATTGCACAAG AAAAGTCTGA TTCTGAAATC AATAAAAACA AAGAAATAGA AAGAATTACC
GTAACAGCGA GCCGAATGGA TAAATCCCCA AGCTCAATCC CCAATACGGT GACCATTATC
GACCGCGTGC AACTCGAAGA GCAGTTCCGC ACCACCAAAG ATTTGTCGAC CATTATTGGT
AACTTAGCAC CCAGCTTTTC ACCCAGCCGC CAAAAGATGA GCAATACGGG TGAAACCCTG
CGTGGTCGTC CGCCATTAAT TATGATCGAT GGCGTGCCGC AATCGAACCC GCTGCGCAGT
GGTGGCCGCT CAGGACAAAC TATCGATCCT GCGATGATTG AACGCATCGA AATTATTCAC
GGTGCCAATG CGATGCACGG CTTAGGCGCA CAGGGCGGTA TCATCAACTA CATAACCAAA
AAGCCCACGG GTGATAACCA GCACGTCGCC AGCTTTGATG TCACAGTCCC AGACTCACTC
AAGTCTAACG GTGTCAGTTT TGGTGCCAGC TATGCGTTTT CAGGCGAGTC AGAATTGATC
GATATGCTAG GCTCGGTCAG CTATCGTAAT AACGGTGTTT ACTACGATGC CAATCACGAT
GTGATTGGGG TGGACACCAC GCAAGGCGAG TCCATGGATA GCCAAAGTAA GGACTTCTTC
ATCAAGTTAG GCCACAACTT TACCGAGTCA CGCTTAGAGC TAATGGTTAA CCATTACAAC
ATGGATAACA ATGGCGACTG GATGGCCGTT GCAGGTAATA AACCCAATGG TATTCCAACG
GGTGCAGTAG AAGAAAAACA ACCCTGGGAA GCGGCTAATA ACGAAGTCAC CACCACGAGT
TTGACCTATA CCCACGAAAA TATTGCAGGT CAACAACTGA GCATGCAGTT GTTTAATCAG
GACTTTAAAG CCGTATACCG GTGGAGGATG CTTCGATAG
|
|---|
| Protein sequence | MTFKTSFVAL AVLTALTQSA IAQEKSDSEI NKNKEIERIT VTASRMDKSP SSIPNTVTII
DRVQLEEQFR TTKDLSTIIG NLAPSFSPSR QKMSNTGETL RGRPPLIMID GVPQSNPLRS
GGRSGQTIDP AMIERIEIIH GANAMHGLGA QGGIINYITK KPTGDNQHVA SFDVTVPDSL
KSNGVSFGAS YAFSGESELI DMLGSVSYRN NGVYYDANHD VIGVDTTQGE SMDSQSKDFF
IKLGHNFTES RLELMVNHYN MDNNGDWMAV AGNKPNGIPT GAVEEKQPWE AANNEVTTTS
LTYTHENIAG QQLSMQLFNQ DFKAVYRWRM LR
|
|---|
| |