| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4417 |
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| Symbol | dcuB |
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| ID | 1172014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4609208 |
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| End bp | 4610551 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637346137 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | NP_719940 |
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| Protein GI | 24375897 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTAA TGGAATTTAT TGTCGTACTC GGCTGTTTGC TGCTGGGCAC CCGCTATGGG
GGCATGGGCC TCGGGCTGAT TAGTGGTATT GGCTTGTTTT TACTGACGTT TGTCTTTGGC
CTTGCCCCCG GACAACCGCC AGTGCAAGTG ATGTTAACCA TTCTTGCAGT TATCGGCTGT
GCTGCAGTAT TGCAAACCGC GGGCGGCTTA GATGTGATGA TGCAGTTTGC CGAACGCTTA
CTGCGCCGCC ATCCGCAGTA CATTACCATT CTGGCACCAT TAACCACGTG GACACTGACC
TTTTTGTGCG GTACGGGCCA TGTGGTTTAC ACCATGTTCC CGATTATCTC TGATATCGCC
TTGAAGAAAA ACATTCGTCC AGAACGCCCG ATGGCTGTTG CCTCGGTCGC ATCGCAAATG
GCAATTTGTG CTTCGCCCGT ATCGGTTGCC GTCGTTTCTA TGGTATCGAT TTTGGCGGCG
CAGCAGGGCG TCGGTCATGC CTATAGCATG CTGGAAATTT TAATGGTGTC CGTTCCCGCA
TCCCTTTGCG GTGTGTTAGT GGCAGCACTG TGGAGCCTGC GTCGTGGCAA AGATTTAGAT
AAAGACGAAG AGTTTCAAGA ACGAATTCAA GATCCGGTGC AAAGAGCCTT TATCTACGAC
AAGGGCGAAA CGCTGCTCAA TCAAACCTTC CCCAAGCAAG CGTATTGGGC AACGGGGATC
TTCTTTGCCG CTATCGCCGC CGTGGTATTA CTCGGCTCCT TTAGCGAGTT GCGCCCAGTA
TTTGAAGAGA AAGGCAAGCT AGCGCCACTG TCGATGAATC TGGTGATCCA AATGATGATG
TTGATCGCGG GCGCCTTTAT CTTGATGAGC TGCAAAGTCA AACCGGCTGA GATTGCCAAT
GGTCCGGTTT TTAAAGCGGG TATGGTGGCG ATTTTCTCGG TATTTGGCGT GGCATGGATG
AGCGATACTT TCTTTATCAG CCATATGGAT GTACTGAAGG AAAACCTCTC CCACGTGGTG
CAAAACCAGC CTTGGACCTA TGCCCTAGTG CTGTTTTTAA TATCTAAACT GGTCAACAGC
CAAGCGGCTG CGCTCACCGC AATCGCACCG ATGGGATTGG CTTTAGGCGT AGATCCTAAG
CTGTTAATTG CTTTTTTACC CGCCAGCTAT GGCTACTTTG TGCTGCCAAC TTATCCAAGC
GATTTGGCCT GTATCGGTTT CGACCGTTCT GGCACCACTA AAATTGGTAA GTTCATCATT
AACCACAGCT TTATTATCCC AGGGCTGATT GGTGTTGGTA CCGCATCAAC TGTCGGTTAT
CTGCTGGCAA CTGCGCTACT GTAA
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| Protein sequence | MILMEFIVVL GCLLLGTRYG GMGLGLISGI GLFLLTFVFG LAPGQPPVQV MLTILAVIGC
AAVLQTAGGL DVMMQFAERL LRRHPQYITI LAPLTTWTLT FLCGTGHVVY TMFPIISDIA
LKKNIRPERP MAVASVASQM AICASPVSVA VVSMVSILAA QQGVGHAYSM LEILMVSVPA
SLCGVLVAAL WSLRRGKDLD KDEEFQERIQ DPVQRAFIYD KGETLLNQTF PKQAYWATGI
FFAAIAAVVL LGSFSELRPV FEEKGKLAPL SMNLVIQMMM LIAGAFILMS CKVKPAEIAN
GPVFKAGMVA IFSVFGVAWM SDTFFISHMD VLKENLSHVV QNQPWTYALV LFLISKLVNS
QAAALTAIAP MGLALGVDPK LLIAFLPASY GYFVLPTYPS DLACIGFDRS GTTKIGKFII
NHSFIIPGLI GVGTASTVGY LLATALL
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