| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4320 |
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| Symbol | aggA |
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| ID | 1171925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4507146 |
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| End bp | 4508561 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637346046 |
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| Product | agglutination protein |
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| Protein accession | NP_719845 |
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| Protein GI | 24375802 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTT TAGTAAGACG CCAATTTCAA TGTTCAAAAA TAGCGGTCCT GCTGTCAGCT
ATTTTGCTGC CACTATCCGC TCAAAGCCAA ACACTTGAGC AAGCGGTTGC ACACACACTC
GATACAAACC CAGATCTACG AGTGGCGTTT AACCGCTTTA AAGCGAGAGA AGAGCAAGTG
AATCAGGCAA TTGCTGGTTA CATGCCAACA GTTGATCTCA CTGGTGGTTA TGGCTACGAG
CAAACAGATA GCGTATCAAC CCGTCGACGT AAAAATGTCG GCGATGTCGA TAGCAATGGC
GTAGCAGAAC TAAACCGTGG TGAGTTTGGT ATTAGCCTAA AACAAATGCT GTTTGATGGC
TTTTATACCA GTAGCGAAGT TGACCGTTAT AGCTTTGAAG CCAGTGCAGA CCAATGGGCA
CTTCTCGCTG CCGCCGAAGA TATGGCGTTA GATGTCAGTA AAGCGTATCT CAACTATCTG
CGCACCGATG AGGTATTAAA GCTGGCGGAG AAAAACCTCA ACAGCCATAA AGAAATCTAT
GATCAAATTA AGCAACGTAC TGACTCTGGC TTGGGCTCAA CCGCCGATCT TTCACAAATT
TCAGGACGTC TTGCAAGGGC TAATGCGAAT GTGATTTCCG CGCGTAACAA TTTACTCGAT
GCAAAAGCAC AATTTGTGCG AGTCGTTGCG GCCGACCCCG TTGACTTGAT TCAACCCGTT
CCTGATGCCG ATATGCTTCC TAAGGATTTA AACAGCAGTA TTGCTGATGC CGAGAAAAAT
CATCCCATCC TTAAATCTGC AGCAAACGAT ATTCGTGCGG CTGAAAATGA GCGTTCATCA
ACCCAAGCCA ACTATTATCC GCAAGTTTCA TTAGAGCTAA ATGGTAGCTG GAACAATGAT
GTTGGGGGTG AAGATGGTGT AAGCGCAATA GCAAGCCAAA ACGTAGGTGG TTACAGTAAC
GATATCGTCG CCATGGTGCG AGTCAAATAT AACCTCTTTG CAGGCGGTAA AGACCTTGCT
CGCGAAAAAG AATCTGCTTA CAAACTCAGT GAAGCCAAAG AAATCCGTCA GCGCGCACAA
AGAGAAGTCG TAGAAGGGGT CAATCTGGCA TGGAATGCCT ACGAAATGTT AGCGCCTCAA
AAGCAATACA TACGTGACCA TGTGATAGCC GCCAAAGATA CTCAGTCTGC CTATGCGCAG
CAATTTAACC TTGGCCAACG CAGCTTACTC GACTTACTTG ATACTGAAAA TGAGTTGTTC
GAAGCACGTA AGGACTATTT ACAAGCTGAA TACGATGAAA CCATTGCGAA ATATCGTGTA
CTAAATTCGA CTGGCCGCCT ACTCGACTCA CTCAAAGTAA CCCGTCCTGA AGCATGGCGT
GGAGAACGTA ACTACGAAGG AGGAGCAAAT CAATGA
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| Protein sequence | MKTLVRRQFQ CSKIAVLLSA ILLPLSAQSQ TLEQAVAHTL DTNPDLRVAF NRFKAREEQV
NQAIAGYMPT VDLTGGYGYE QTDSVSTRRR KNVGDVDSNG VAELNRGEFG ISLKQMLFDG
FYTSSEVDRY SFEASADQWA LLAAAEDMAL DVSKAYLNYL RTDEVLKLAE KNLNSHKEIY
DQIKQRTDSG LGSTADLSQI SGRLARANAN VISARNNLLD AKAQFVRVVA ADPVDLIQPV
PDADMLPKDL NSSIADAEKN HPILKSAAND IRAAENERSS TQANYYPQVS LELNGSWNND
VGGEDGVSAI ASQNVGGYSN DIVAMVRVKY NLFAGGKDLA REKESAYKLS EAKEIRQRAQ
REVVEGVNLA WNAYEMLAPQ KQYIRDHVIA AKDTQSAYAQ QFNLGQRSLL DLLDTENELF
EARKDYLQAE YDETIAKYRV LNSTGRLLDS LKVTRPEAWR GERNYEGGAN Q
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