| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4314 |
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| Symbol | hemD |
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| ID | 1171919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4491561 |
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| End bp | 4492301 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637346040 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | NP_719839 |
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| Protein GI | 24375796 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTCT TACTGACGCG CCCCGAGGGG CGCAATCAGT CCATGGTCGA TGCCTTGAAT
GAAAGAGGCA TCGAACACTG CGTTACGCCA CTACTTTGTG TTGAGGCGAC ACCGGCTCTA
CCTCCTGAAA CCTCACATCC ACTCGCTAAT GTCGATATGG TTGTCTGTAT CAGCGCCAAT
GCGGTTAGCT TTGCTGACGA TACGTTTAAA GCCAATGATG CCAACGTTAA AGGCTGGCCA
AAAGTGCCTT ATTTCGCTGT AGGGCATGCC ACTTGGGAAG CACTACAACA AATCGACATC
GATGCCCTTG AGGCGCCCGA TGATTGCCAG CAGACTGAAG GGTTACTAAC TCTACCTACG
CTGCAACACA TCCAAGGCAA AAAGATTACC ATTATTCGCG GTGTTGGTGG CCGTGAAGCG
CTCGCTGAAC AACTGACATC TAGAGGCGCA CAGGTGCGCT ATTGGGAAGT CTATCAACGT
GCTTGTCCGC CGCTGGATGG CACTATTATC ACCCAACAGT GGATAGACTT AGGGATAGAT
ACTGTCGTGG TGACAAGCGG AGAAGTACTG GATAATCTGA TTAATCTAGT GCCAAAAGAG
TTATTTGCAT GGCTGCGCTC ATGTCATATC ATAGTCCCCA GTAACCGAGT AGAAGCTCAA
GCTCATGCCT TTGGTATAAC CCAAGTCACC AATGCCAATG CCGCCAACAG CAAAGCCGTG
CTAAACGCCC TTAAACTCTA A
|
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| Protein sequence | MKVLLTRPEG RNQSMVDALN ERGIEHCVTP LLCVEATPAL PPETSHPLAN VDMVVCISAN
AVSFADDTFK ANDANVKGWP KVPYFAVGHA TWEALQQIDI DALEAPDDCQ QTEGLLTLPT
LQHIQGKKIT IIRGVGGREA LAEQLTSRGA QVRYWEVYQR ACPPLDGTII TQQWIDLGID
TVVVTSGEVL DNLINLVPKE LFAWLRSCHI IVPSNRVEAQ AHAFGITQVT NANAANSKAV
LNALKL
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