Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4313 |
Symbol | hemC |
ID | 1171918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4490624 |
End bp | 4491556 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637346039 |
Product | porphobilinogen deaminase |
Protein accession | NP_719838 |
Protein GI | 24375795 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAA ACCGCATACG TATCGCTACC CGCAAGAGTC CGCTGGCCAT GTGGCAAGCA GAATTTGTTA AAGCAGAATT AGAACGCATT CACCCTGGTA TTGTGGTGGA GCTATTGCCA ATGAGCACTA AGGGCGATGT TATCTTAGAC ACGCCATTAG CTAAAGTCGG TGGCAAAGGC TTGTTCGTTA AAGAACTCGA AGTCGCCATG CTGGAAGATC AAGCCGACAT CGCGGTGCAC TCAATGAAAG ACGTGCCTGT AGATTTCCCC GAAGGATTAG GACTGGAAGT CATTTGTGAG CGTGAAGATC CTCGCGATGC TTTTGTCTCC AATATTTATA AGTCGATCAG TGAGTTGCCA CTTGGTGCCA CGGTTGGTAC TTCTAGCCTG CGCCGTCAGT GCCAACTGCG TGCTTCCCGT CCCGATCTTA TCATCAAAGA TCTGCGTGGC AACGTAGGTA CTCGCCTCGC GAAACTCGAT AACGGTGAAT ACGATGCGAT TATTCTTGCC GCGGCAGGCT TAATCCGCCT GAAGTTATCT GAGCGTATCG CCAGCTTTAT CTCTGCCGAA GAGTCCTTAC CCGCAAACGG TCAAGGTGCT GTCGGTATCG AATGTCGCAC CAATGATGAG CGCGTTAAAG CATTATTAGC GCCATTAGAA CACTTAGAGA CACGCTACCG CGTGATCGCC GAGCGCGCGA TGAATACTCG CCTTGAAGGT GGTTGCCAAG TCCCTATTGG CGCCTTTGCC GAAATTGATG GTGATGAGAT GACACTGCGC GGATTAGTGG GTAACCCAGA TGGCAGTGAA ATCATCGAAG GCGTGATCAC CGGTCCTAAG ACCGAAGCCA CGCAATTAGG TGTTGCCCTT GCGGAAGAAC TACTCAGCAA AGGCGCCAAA AGCATCCTCG ATGCTGTTTA CGCCAAAGCC TAA
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Protein sequence | MSENRIRIAT RKSPLAMWQA EFVKAELERI HPGIVVELLP MSTKGDVILD TPLAKVGGKG LFVKELEVAM LEDQADIAVH SMKDVPVDFP EGLGLEVICE REDPRDAFVS NIYKSISELP LGATVGTSSL RRQCQLRASR PDLIIKDLRG NVGTRLAKLD NGEYDAIILA AAGLIRLKLS ERIASFISAE ESLPANGQGA VGIECRTNDE RVKALLAPLE HLETRYRVIA ERAMNTRLEG GCQVPIGAFA EIDGDEMTLR GLVGNPDGSE IIEGVITGPK TEATQLGVAL AEELLSKGAK SILDAVYAKA
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