Gene SO_4256 details

Gene Information

• Locus tag: SO_4256
• Symbol: rph
• ID: 1171859
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4432337
• End bp: 4433050
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637345981
• Product: ribonuclease PH
• Protein accession: NP_719783
• Protein GI: 24375740
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0689] RNase PH
• TIGRFAM ID: [TIGR01966] ribonuclease PH

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCCAA GTAACAGAAC GCCAGCACAA ACACGTCCCA TCACTATCAC TCGCCAATTT 
ACGGCCCATG CCGAAGGTTC TGTGTTAGTG GAGTTTGGCG AAACCAAAGT GCTTTGCACC 
GCCAGTTTTA CTGAAGGTGT GCCACGTTTC CTTAAAGGTC AGGGTCAAGG CTGGGTGACG 
GCGGAATACG GCATGTTGCC ACGCTCAACC CATAGCCGTA TGGACCGTGA AGCCGCTCGT 
GGTAAACAAT CTGGTCGTAC GCAAGAAATT CAACGCCTTA TCGGTCGTGC GTTGCGTGCC 
TGTGTCGATA TGAAAGCGCT GGGTGAAAAC ACCATTGTCA TCGATTGTGA TGTGATCCAA 
GCCGATGGCG GTACCCGTAC TGCGTCAATC ACCGGTGCCT GTGTTGCCTT AGTGGATGCG 
CTGAACTGGG CCCGTGGTAA AGGCATTATT AAATCTAACC CGCTTAAGTT CTTAATTGCA 
GCGGTCAGCG TGGGTATCTA CAACGGTGAA GCGATAAGCG ATTTAGAGTA TGTGGAAGAC 
AGCGCTGCCG AAACCGATAT GAACGTGGTA ATGACAGAAA CCGGTAAGAT TATCGAAATT 
CAAGGCACTG CCGAAGGTGA GCCGTTTACT CACGAAGAGT TGATTGAGCT ACTCGGTTTA 
GCGAAGAACA GTATTCGCGA AATCGTTGAT GTACAGAAAG CCGCTTTAAA CTAA 

 

Protein sequence

MRPSNRTPAQ TRPITITRQF TAHAEGSVLV EFGETKVLCT ASFTEGVPRF LKGQGQGWVT 
AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRALRA CVDMKALGEN TIVIDCDVIQ 
ADGGTRTASI TGACVALVDA LNWARGKGII KSNPLKFLIA AVSVGIYNGE AISDLEYVED 
SAAETDMNVV MTETGKIIEI QGTAEGEPFT HEELIELLGL AKNSIREIVD VQKAALN