Gene SO_4255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4255 
SymbolpyrE 
ID1171858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4431516 
End bp4432163 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content49% 
IMG OID637345980 
Productorotate phosphoribosyltransferase 
Protein accessionNP_719782 
Protein GI24375739 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCCT ATCAACGTGA GTTTATTGAA TTTGCCCTTG AGCGTCAGGT GTTGCGATTC 
GGCGAGTTTA CCCTTAAATC GGGCCGTATC AGTCCTTATT TCTTTAATGC AGGCCTATTC 
AATACTGGCC GAGATTTAGC GCGTTTAGGG CGTTTTTACG CCGCTGCGTT AGTGGATTCA 
GGTATTGATT ACGATCTGCT ATTTGGCCCT GCCTACAAAG GTATCCCGAT TGCGACGACT 
ACCGCAGTGG CACTCTGCGA ACATCACAAT ATTGATATTC CTTACTGCTT TAACCGCAAA 
GAAAAAAAAG ATCACGGTGA GGGTGGCAGC TTAGTGGGGA GCGAGCTTAA AGGTCGGGTG 
ATGTTGGTGG ATGATGTGAT CACTGCCGGT ACGGCGATCC GTGAGTCGAT GGAAATCATT 
GAAGCCCATC AAGCGCAGCT CGCTGGCGTA TTAATTGCGC TGGATAGACA AGAAAAGGGC 
AAGGGCGAAT TGTCGGCGAT TCAAGAGGTT GAGCGTGATT TTGGCTGCGG TATTGTGGCG 
ATTATCAAAC TGGCCGATCT GATCAGCTAT CTGTCTGAAA AGCCGAGAAT GGAAGCGCAG 
TTGGCGGCGG TGAGCCAGTA TCGTGAGCAA TATGGTATCG AGGCCTAA
 
Protein sequence
MKAYQREFIE FALERQVLRF GEFTLKSGRI SPYFFNAGLF NTGRDLARLG RFYAAALVDS 
GIDYDLLFGP AYKGIPIATT TAVALCEHHN IDIPYCFNRK EKKDHGEGGS LVGSELKGRV 
MLVDDVITAG TAIRESMEII EAHQAQLAGV LIALDRQEKG KGELSAIQEV ERDFGCGIVA 
IIKLADLISY LSEKPRMEAQ LAAVSQYREQ YGIEA