Gene SO_4251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4251 
SymbolslmA 
ID1171855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4427793 
End bp4428386 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content45% 
IMG OID637345977 
Productnucleoid occlusion protein 
Protein accessionNP_719778 
Protein GI24375735 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAA GCCCAAAAAT TAATCGTCGT GAACATATAC TGCAATGCCT AGCACAAATG 
CTAGAAACCA GCCCCGGACA ACGTATTACC ACCGCCAAAC TTGCCTCTGA AGTGGGTGTA 
TCGGAAGCGG CACTCTATCG CCACTTCCCG AGTAAAGCGC GGATGTTTGA AGGGTTAATT 
GAGTTTATTG AAGAGTCATT ACTCTCACGC ATCAACATCA TCATGGATGA TGAAAAAGAT 
ACGATGAAAC GCTGTCAATT AGTGCTGCAA CTGTTGTTGA TTTTTGCTGA GCGTAACCCG 
GGGATCTCGC GCGTACTCAA TGGGGATGCG CTATTGGGCG AAAATGAGCG TCTGCGTAGC 
CGCATTAGTA CGTTATTTGC CAAAATAGAA ACCCAACTTA AGCAAATTTT GCGAGAAAAG 
ACCCTGCGAG AAGGCAAAGG CTTTAATTTA GATGAGGCTA TTTTAGCCAA TTTACTGTTA 
GCTTTCGCAG AAGGACGAAT TGCTCAATTT GTCCGCAGTG AGTTTAAACT CAAACCCACA 
CAACACTTCG ATGAACAGTG GCGCTTTATT CAGCATCAGC TGTTGCAAAG CTAA
 
Protein sequence
MAVSPKINRR EHILQCLAQM LETSPGQRIT TAKLASEVGV SEAALYRHFP SKARMFEGLI 
EFIEESLLSR INIIMDDEKD TMKRCQLVLQ LLLIFAERNP GISRVLNGDA LLGENERLRS 
RISTLFAKIE TQLKQILREK TLREGKGFNL DEAILANLLL AFAEGRIAQF VRSEFKLKPT 
QHFDEQWRFI QHQLLQS