Gene SO_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4248 
SymbolradC 
ID1171852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4425276 
End bp4425953 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID637345974 
ProductDNA repair protein RadC 
Protein accessionNP_719775 
Protein GI24375732 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTA AGGATTGGCC AGAGGGAGAA GGGCCGCGGG ATAAGTTATT GCTAAAAGGC 
GCCAGCCATC TCTCGGATGC AGAATTGCTG GCGGTGTTGC TGCGTAATGG CCTGTCGGGA 
CTGAACGCCG TAGACCTTGC TCGTTCACTT ATTCAAGAAT TTGGTGGCTT AAGAAGCTTA 
CTTTGCGCAC CAAAGCATCA GGTGTGTCGA CTTCCGGGCG TGGGACCTGT AAAATACGCC 
CAGCTTCAAG CCGCGGCTGA ATTAGCGCGA CGTGTGGCAC AAGAAAACCT GCAGAGAGGT 
CAGGTTTTGA CAAATCCCGA TTTAACTCGG GATTATTTAA TGAGACAATT AGCTGACCGC 
TCCTATGAAG TGTTCGCAAT TTTGCTGCTG GATAGCCAGC ATAGAGTGAT TCAGTTCGTC 
GAATTATTCC GCGGAACAAT AGATTCAGCC TCAGTATACC CACGTGAAGT GGTAAGCTTA 
GTGCTGGAAA AAAAGGCTGC TGCCGTCATA GTGTGTCACA ATCATCCGTC TGGTATTGCC 
GAGCCCAGTC AGGCTGACAG ACGAATAACT GAGCGATTAA AAAATGCGTT GGCAACCATA 
GATGTATCCC TATTGGATCA TATGGTTGTT GGTGATAGAG AGATAGTTTC CTTCGCGGAA 
CGAGGCTGGA TTAATTAA
 
Protein sequence
MAIKDWPEGE GPRDKLLLKG ASHLSDAELL AVLLRNGLSG LNAVDLARSL IQEFGGLRSL 
LCAPKHQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLADR 
SYEVFAILLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA 
EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN