Gene SO_4230 details

Gene Information

• Locus tag: SO_4230
• Symbol: glpK
• ID: 1171834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4405452
• End bp: 4406936
• Gene Length: 1485 bp
• Protein Length: 494 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637345957
• Product: glycerol kinase
• Protein accession: NP_719758
• Protein GI: 24375715
• COG category: [C] Energy production and conversion
• COG ID: [COG0554] Glycerol kinase
• TIGRFAM ID: [TIGR01311] glycerol kinase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TCATTGTGAT TGGGGCGGGA TTAGGTGGCG TATCAGTGGC ATTTGAACTC 
AAACAACGAT TACCCTCCGA TTGTGAAATC GGCGTGATAA GTGAGGGCAC TGATTTTCAA 
TTTGTGCCTT CTAATCCTTG GGTCGCCCTC GGTGAACGTA CACGTGAAGA CATTAGCCTA 
CCCATTGGGA CTTACTTGGC TAAACGCAAA ATAAGTTATT CGGGTGAAGG TGTTACCCAT 
ATAGACCCAC TCAACAAAAA GCTCACCTTA GGGGATGGTA CAACAAATAA TTACGACTAT 
TTAGTCATCT GCACAGGCCC TAAACTCGCC TTTGAAAACG TCCCAGGTTC GGGCCCTGAA 
GGGTTTACTC AATCTATTTG TACCATTGAT CACGCCGAAA AAGCCTATGA ATGCTTTCAA 
CAACTGCTCG CAAAACCCGG CCCAGTGGTA GTAGGCGCAT TGCAAGGTGC AAGTTGTTTT 
GGTCCAGCCT ATGAGTATGT GTTATCCCTA GAAAGCTTAT TACGTAAACA TAAAGTTCGT 
CAGCATATCC CTATTACCTT TGTGACCAGT GAGCCCTATG TGGGTCATAT GGGGCTCGGT 
GGCGTTGGGG ACTCTAAGTC ACTTATGGAG CACGAATTTA GAGAACGTAG CATCAAGTGG 
ATTTGCAATG CTAAAACAAC CCACTTTGAA TCAGGTATAG CTTATGTTGA CGAATTAGAT 
CGAAAGGGCG AAGTAGAATT CCAACATACC TTACCCTTCT CATTGGCGAT GTTTTTACCG 
CCCTTCAAGG GCAGTGCTGC CATTGCAGCG GTACCTGAGC TATGTAACGA GAAAGGCTTT 
GTTCTCACCG ACACCTTCCA ACGATCACCA CGTTACCCAG AAATCTATGC CGCTGGAGTT 
TGTGTCGCGG TGCCACCACT GGAAAACCCC CAGTACCGAT TGGCGTACCC AAAACAGGTT 
TTATGA 

 

Protein sequence

MQKKYVVALD QGTTSSRAIV FDHDANIVSV SQREFTQLYP NPGWVEHDPM EIWASQSSVL 
IESLARAGIH SDAVAAIGIT NQRETTIIWE KATGKPVYNA IVWQCRRSAE ICEQLKAQGL 
EDYVRQNTGL LLDPYFSGTK IKWILDNVPD ARAKAKRGEL LFGTVDTWLL WKLTEGKVHV 
TDPTNAARTL LFNIHSLSWD SKLLEALDIP AAMLPEVKPS CSVYGTTRIA GEGSEIPLAG 
IAGDQQAALF GQLCVEQGMA KNTYGTGCFL LMNTGSKAVR SSHGLLTTVA VGAQGEVNYA 
LEGSVFMGGA TIQWLRDELG LIRDASDTEY FASKVADTNG VYLVPAFVGL GAPYWDPNAR 
GALFGLTRGA NRNHIIRAAL ESIAYQSKDL LDAMIKDSGV SLKRLKVDGG AVANDFLMQF 
QADITDVEVL RPSVCETTAL GAAFLAGLAV GFWNSVTELE HKACIDTHFK PSINADYRQQ 
LYAGWQDAVA RTRS