| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4224 |
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| Symbol | murE |
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| ID | 1171828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4399230 |
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| End bp | 4400705 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637345951 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | NP_719752 |
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| Protein GI | 24375709 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTAA GGGAGCTACT CGCGCCTTGG TTTCCCTACG CGGGTGAACA AACTTTCTTA
GATTTGACCT TAGACAGCCG CGCAATACGT CGCGGCGATG TGTTTTTGGC GCTGCCAGGG
CATAAGGTCG ATGGTCGACA ATTTATTGAT AAAGCTTTAG CCCAAGGTGC GACTGCGGTG
TTAGTGCATA CGGATAATCC GCAAGAGCAG GGAAAGGTCA TTGTGGCTGA GCAAGGCGTG
CAGATTTACT TCTATGAGTT AGCTAAGCAC GTTTCAGCGG TGGCTGCGGT GCGATACCCC
GTCATCCAAG GGCACGCTAT GGGCATCGTG GGGATTACAG GGACCAACGG CAAGACTTCG
ACAAGCCAAC TGTGCGCGCA ATTAGTGACC CTGCTTTCAG GTAAAGCGGC GGTGATGGGC
ACGCTAGGCA ATGGCCTGTG GGGCGAGCTT GTTGACAGCG GCAATACCAC CGCCGATGCC
ATTACCCTAA TGCGCCAGCT CCATGAATTT GCAAATAAAG GTGTAAATAC CTGTGCGATG
GAAGTCTCGA GCCATGGTTT AGTCCAAGGG CGAGTCGATG CGGTGCCCTT CGATGTGGCG
GTGTTCACTA ACTTAACGCG GGATCACTTG GATTATCACG GCGATATGGA AAACTATGCC
GCCGCCAAGC AAATGCTATT TCGCTTCGAC TCCCTGCGCC ACGGTTTACT GAATTTAGAC
GATCCCATCG GGGGCGCTTG GTTAGCCGAG CTTAAAAATG TGCCTGCGAA GATTTGGGGT
TTTAGCATTG AAGCGCATAA AGCCGCAGCG TTTTACACTA AGAATGTCAG ATTTAACGAT
CAAGGCGTGC AGGCGACGTT AGTCTGGCCT GAGGGCGAAA TCGATATCAG CTCCCCTTTA
TTAGGTGCTT TTAACCTATC GAATTTACTC GCTGCGCTAT CAGCCTTGTA TTTACAGGGA
ATGGATATGC GTGCATTAGC TGCCAAGGTG CCTTACTTAG TGCCTGTGGC TGGCCGCATG
GAACGTTTTA CTACCGCAGA TAACATCACC TTAGTGGTCG ATTATGCCCA TACCCCCGAT
GCCATTGAAC AGGCGCTTAA TGCCCTGCGT CGTCACTGTG CTGGGGTGCT TTGGTGTGTG
TTTGGCTGTG GTGGTGATCG CGATAAGGGC AAGCGGCCAT TAATGGGGCA AGCGGCGGAG
CAATTTGCCG ATCGCATTAT GGTGACTAGC GATAATGCCC GCAGTGAAGA TCCTAACCAA
ATTATTACCG ATATTATCCA AGGGCTAACT CATCCTGAGC GAGCACTGAC CGAGGTTGAC
CGTGTGGCTG CGATTAAACA AGTCGTGGCA CAGGCTAAAT CTGGGGATGT GATTTTGCTT
GCGGGCAAAG GCCATGAAAC TTACCAAGAG GCGGCAGGTG TGCGTCATGA CTATGATGAA
CGCGCCCTGG CACGTCAGTT ATCGGAGCAA AGCTAA
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| Protein sequence | MLLRELLAPW FPYAGEQTFL DLTLDSRAIR RGDVFLALPG HKVDGRQFID KALAQGATAV
LVHTDNPQEQ GKVIVAEQGV QIYFYELAKH VSAVAAVRYP VIQGHAMGIV GITGTNGKTS
TSQLCAQLVT LLSGKAAVMG TLGNGLWGEL VDSGNTTADA ITLMRQLHEF ANKGVNTCAM
EVSSHGLVQG RVDAVPFDVA VFTNLTRDHL DYHGDMENYA AAKQMLFRFD SLRHGLLNLD
DPIGGAWLAE LKNVPAKIWG FSIEAHKAAA FYTKNVRFND QGVQATLVWP EGEIDISSPL
LGAFNLSNLL AALSALYLQG MDMRALAAKV PYLVPVAGRM ERFTTADNIT LVVDYAHTPD
AIEQALNALR RHCAGVLWCV FGCGGDRDKG KRPLMGQAAE QFADRIMVTS DNARSEDPNQ
IITDIIQGLT HPERALTEVD RVAAIKQVVA QAKSGDVILL AGKGHETYQE AAGVRHDYDE
RALARQLSEQ S
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