| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4223 |
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| Symbol | murF |
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| ID | 1171827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4397848 |
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| End bp | 4399230 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345950 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | NP_719751 |
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| Protein GI | 24375708 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCAA TTTCCCTCAA GGCACTGAGT CAACACTTAG GTGCACATCG AGTCGGTGAC
GATGTCACCG TCCAAGCATT AAGCAGCGAT AGCCGCAAAA TCGGCCCCGC AACCTTGTTC
GTCGCCTTAA AGGGTGACCG GTTTGATGGC CATGACTTTG CTGCCACAGC AATTGAAAAT
GGTGCCATTG CACTGTTGGT TGAGCGTGAA CTTGCCTTTG ATATCCCGCA GCTTATTGTT
GCCGATTGCC AAAAAGCTAT GGGTGCGATA GGGGCTTATG TGCGCGACCA AGTGAATCCC
ATTTGTGTGG CATTGACTGG TTCAAATGGC AAAACCAGCG TGAAAGAAAT GATTGCCACT
ATTTTGTCTG CCAAGCATCA AGTGCTTTAC ACCGCAGGTA ATTTTAATAA TGAGATCGGC
GTGCCTTTAA CCCTGCTGCG CTTAACACCT GAAGACAAAT ATGGGGTATT TGAGCTAGGT
GCTAACCATA AAGGCGAGAT TGATTACACC TCTGGTTTAG TCCGCCCGCA TGTGGCTTTA
GTCAATAATG TCGGCAGTGC CCATTTAGAA GGATTTGGCT CACAGGCCGG TGTGGCCCAA
GCAAAATCGG AAATCTATAA CCATCTACAA GAAGATGGTA CAGCGATTAT TAACGCCGAT
GACGCCTTTG CTGATGTGAT GCGTGTTAAA GCCAAGCACT ATAAGCAATT GAGCTTCTCC
CAGCAGGAAG GTGCGGCTAA GCGCCAAATT GATGTCATTG CGACTGGGCA TAAAGCCAAT
AGTGATGGCT GTTACCGCTT TATGCTTAAT TATGCGGGCG AGTCCTGTGA AGTGGTTTTA
CCCTTAGCGG GACGTCATCA AGTCAGCAAC GCTTTGGCTG CTGCAAGTGT CTGTATTGCA
TTGGGATTAA ATCTAACAGA AATCGCCGAA GGCCTGAGCC AGCTTACCCC AGTTAAGGGC
CGTATGCAGC CTACTCAATT AGGACGTGTT CGTCTAATCG ATGATAGCTA TAACGCCAAT
CCTGTGTCTG TAGGGGCGGC TATCGCTTGG TTAAAGGAAA TTTCTGAAAA TCGTTGTTTG
GTACTGGGAG ATTTGGGCGA ATTAGGCGAC AATGCGCCCC TTTTACACGC TGAACTGGGA
CAACTAGCAA GGCAACAGGG GATCGATGCC CTGTTCTGTA CTGGTACCTT GACTCAGCAC
ACGAGCCACG CTTTCGGGGC GGAGCACCAT GACAGCGTGG CGACGTTAGT AGAAAAACTC
ATAAAACACA TCAACCAGTT GCCGGGACAG GTGACGGTTT TAGTTAAAGG TTCACGTAGT
GCCGCAATGG AGCGGGTCGT GGATGGCCTA ACAGTAGCCT TCGGGCGTGG GGAGTTAGTG
TAG
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| Protein sequence | MIPISLKALS QHLGAHRVGD DVTVQALSSD SRKIGPATLF VALKGDRFDG HDFAATAIEN
GAIALLVERE LAFDIPQLIV ADCQKAMGAI GAYVRDQVNP ICVALTGSNG KTSVKEMIAT
ILSAKHQVLY TAGNFNNEIG VPLTLLRLTP EDKYGVFELG ANHKGEIDYT SGLVRPHVAL
VNNVGSAHLE GFGSQAGVAQ AKSEIYNHLQ EDGTAIINAD DAFADVMRVK AKHYKQLSFS
QQEGAAKRQI DVIATGHKAN SDGCYRFMLN YAGESCEVVL PLAGRHQVSN ALAAASVCIA
LGLNLTEIAE GLSQLTPVKG RMQPTQLGRV RLIDDSYNAN PVSVGAAIAW LKEISENRCL
VLGDLGELGD NAPLLHAELG QLARQQGIDA LFCTGTLTQH TSHAFGAEHH DSVATLVEKL
IKHINQLPGQ VTVLVKGSRS AAMERVVDGL TVAFGRGELV
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