| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4201 |
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| Symbol | aarF |
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| ID | 1171805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4368162 |
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| End bp | 4369811 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637345923 |
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| Product | ubiquinone biosynthesis protein AarF |
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| Protein accession | NP_719729 |
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| Protein GI | 24375686 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTG CCAGTATCCG CCGCGGTTAT CATGTGATTA AAACCCTACT GCAATATGGG
TTAGATGATG TTTTACCGCC AAAGATGACC CCTTGGTACT TTACACTCGC CCGCAATAGT
CTGTTTTGGA TCCGCAATAA ACACAAAGAT AAATCCGGTG GCGAGCGCTT AAAGCTAGCA
ATGCAGGAGC TAGGCCCAGT GTATATCAAG CTCGGCCAAA TGCTCTCCAC CCGCCGTGAC
TTACTGAGTG ATGAATGGGC GACTGAACTA GCCATGTTGC AGGATAAAGT CCCGCCTTTT
GATGGCGCAC TCGCACGGCT TGCAATTGAA GCTGAACTTA AAGCACCGAT AGAAACCTTC
TTCGATGACT TTAATGAAAC GCCATTAGCC TCGGCCTCAA TTTCGCAAGT GCATACCGCC
ACGCTCAAAT CCAACGGCAA GGCGGTAGTG TTAAAGGTGC TGCGGCCTAA TGTGGAAACC
AAAATCCAAG CCGATCTGTT GCTGATGTCA CAAACGGCAA AGGTTATCGA TTATCTCCTT
GGTGAAGGTA ATCGTTTACG TCCAGCAGAG GTGATTGAAG ATTACCGCGT CACCATTTTA
GGCGAGTTAA ATCTTAAGCT TGAAGCTTTA AATGCCATTA AACTGCGCAA TAACTTTATC
GATTCAGATG CGCTCTACAT TCCTTACGTG TATGAAGAGT TTTGTTATCC ACGTTTAATG
GTGATGGAGC GGATTTACGG CATTCCTGTA TCGGATATCG TCGCTTTAAA GGCACAAGGC
ACTAACTTTA AACTGTTAGC CGAACGGGGC GTTGAGCTGT TTTTCACTCA AGTATTCCGC
GATAATTTTT TCCATGCCGA CATGCATCCG GGGAATATTT TTATCTCCCG CGAAAATCCG
GAGAATCCTT ACTATATTGG TCTTGATTGC GGCATTATGG GCACGCTCAG CGAGGTCGAT
AAGCGCTATC TCGCGGAAAA TTTTCTCGCA TTTTTCAATC GCGACTATCA CCGCATCGCC
CAGCTATATA TTGAATCAGG TTGGGTATCG GAAAAAACCG ATCTGCAAGC CTTCGAGCAA
GCCATCAAGG TCGTTTGTGA ACCTATGTTT AACAAACCCT TAGATGAAAT CTCCTTCGGA
CATGTGTTGT TAGAGCTGTT TCGCACCGCT AGACACTTTG ATATTGTCGT GCAACCTCAG
CTTGTCTTGC TCGAGAAAAC CTTGCTTTAT ATTGAAGGTT TAGGCCGCCA ACTGTATCCG
CAACTGGATC TCTGGCAGAC CGCCAAGCCC TTTTTAGAGC AGTGGATGGC CGAGCAAGTG
GGACCTAAAG CCATGTTTAA AAAGGTATCC ACAAAACTGC CATATTGGTC TGATAAGCTA
CCGGAATTCC CTGAACTAAT TTACGACAAC CTTAAATTAG GCAGGAAATT GCTGAGTTCT
CAGCAACAAA TGCTAGATAA GTATTTGAAA TATCAGCAGC AAGCGCATAA GAGTAATTAC
TTGCTCATCA CTTCTGCAAT TTTATTGATC TGTGGCACGT TATTGTTCAA CCAAGACGCT
ACACTGTTGA GTCCTTATGT GTGCCTGATT TCAGGCGCAG TATTGTGGAT TATCGGATGG
CGATCTAGGC CAAAGAATCG TAAATTTTAG
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| Protein sequence | MTLASIRRGY HVIKTLLQYG LDDVLPPKMT PWYFTLARNS LFWIRNKHKD KSGGERLKLA
MQELGPVYIK LGQMLSTRRD LLSDEWATEL AMLQDKVPPF DGALARLAIE AELKAPIETF
FDDFNETPLA SASISQVHTA TLKSNGKAVV LKVLRPNVET KIQADLLLMS QTAKVIDYLL
GEGNRLRPAE VIEDYRVTIL GELNLKLEAL NAIKLRNNFI DSDALYIPYV YEEFCYPRLM
VMERIYGIPV SDIVALKAQG TNFKLLAERG VELFFTQVFR DNFFHADMHP GNIFISRENP
ENPYYIGLDC GIMGTLSEVD KRYLAENFLA FFNRDYHRIA QLYIESGWVS EKTDLQAFEQ
AIKVVCEPMF NKPLDEISFG HVLLELFRTA RHFDIVVQPQ LVLLEKTLLY IEGLGRQLYP
QLDLWQTAKP FLEQWMAEQV GPKAMFKKVS TKLPYWSDKL PEFPELIYDN LKLGRKLLSS
QQQMLDKYLK YQQQAHKSNY LLITSAILLI CGTLLFNQDA TLLSPYVCLI SGAVLWIIGW
RSRPKNRKF
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