Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4154 |
Symbol | |
ID | 1171764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4329024 |
End bp | 4329935 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637345883 |
Product | LysR family transcriptional regulator |
Protein accession | NP_719683 |
Protein GI | 24375640 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCATA TAAACGATCT GCAACTTGCC TTGCGTATCG CTGCGCTAGA AAGCCTCTCC GCCGCCAGTA AAGAAGTCGG CATGACACCC GCCGCCGCGA GCGCGGCACT GCAACGGCTT GAAAAAAAGT TAGGTTGTCA GCTGTTTGCG CGCTCAACTC GGCGGTTGCA GCTCACGGAA GAAGGCCGAA TATTTCTCGA TGCTGCCAAG CCAGCACTTG CGTTACTCGA AACCGCTTCC GCCAATTTGG CCGAGCATAG GGGCGAGCTT AAAGGCGAAG TGCGCCTCGC CCTGCCCTCG GATATTGGCC GCAGCCGGAT CCGCTATTGG TTAGACGAAT TAATGGATAG CGCGCCAGAA TTGTCGATTC AGCTGTACTT TGGCGACCAT ATGACGGATC TCATCGATCA AAATATCCAT TTAGCCCTGC GCTATGGCCA GCTTGAAGAT TCCAATCTAA AGCGGCGCCA ACTGTCGATG ACCCCAAGGG TGCTCGTCGC CTCTCCCGCG TATCTTGCTC AATATGGTGA GCCGCTAACA CTGAACGAGC TGAGTCAGCA CTCAGTGTTG ATCCTCAACC GTGGCGGCGA GCCGTGGCAG AAGTGGAAAT TCAGCCATAA TGGTGAAGCC GTAGAAATTG AAGTGAGAGG AAAACGCTTC TGCAATGATG GCGCCGTGAT CCGCGACTGG GCGCTAGATG GCCGTGGCAT CGCCTATAAA AGCTGGCTCG ATGTGGCGCA GGATGTTACC GAAGGCAGAC TCAAGCTAGT ATTAGCCGAT AAAATCGCCC CACCTATCCC CCTGCAACTG GTTTATCTAC AAACCGATTA CCCTAGCCAT AAAATTCGCC GCACCATTGA GTTTTTAGCG CAAAAACTGC AGCAATTTAG CCAAGAATAT CCAGCGCCTT AA
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Protein sequence | MYHINDLQLA LRIAALESLS AASKEVGMTP AAASAALQRL EKKLGCQLFA RSTRRLQLTE EGRIFLDAAK PALALLETAS ANLAEHRGEL KGEVRLALPS DIGRSRIRYW LDELMDSAPE LSIQLYFGDH MTDLIDQNIH LALRYGQLED SNLKRRQLSM TPRVLVASPA YLAQYGEPLT LNELSQHSVL ILNRGGEPWQ KWKFSHNGEA VEIEVRGKRF CNDGAVIRDW ALDGRGIAYK SWLDVAQDVT EGRLKLVLAD KIAPPIPLQL VYLQTDYPSH KIRRTIEFLA QKLQQFSQEY PAP
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