Gene SO_4152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4152 
Symbol 
ID1171762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4327132 
End bp4327776 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content51% 
IMG OID637345881 
Producthypothetical protein 
Protein accessionNP_719681 
Protein GI24375638 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACC GTATTGATTG CCCTGTTTCT CCGTGGATAA AAGTGGGTTT ATTAAGTTCA 
GGGTTACTCG GCTTAGCACT TTTAGGCTTT GCAATTGCCG GCCTCAGCAT GACGGTTTTT 
GCCGCTCAAG GTAACTCAAC TCAGGCGAGT GTCGATGTGA AAACAGCCTT AAGCCCTAAG 
GTGACGGCAA TGGAGCTGAT CAGTGATGGC TCACCACAGG CGCAATCCAT TGCTCGTGCA 
GCCCTGTTAT ATGCCAGCTT TTGGGATACC GGTGACCCTA GATTTGCCCA CTGGGCATTA 
GCGACAGGTT TTATTGACCG CACTCTGCCC CAAGGCCGAG CTCAAGGGAT TAGCGGACCG 
CTTGAAGCCT CTAAAACCTT TAGGGTGGCA GTGCCTGATC TCTCGGTGAC CGTTGAGCAT 
TTACTGGTGG TAGGCGATCA CGCCGTAGTA CGCCTCCGCT TTAATGGCCA CTTTACGGGA 
GTCTTTGGTG AGCAACGTGG TCAAGGGCAA AAAATCGATT TTCGGGCGGT AGATATGTAC 
CGCGTACGTG AGGGGTTTAT TACCGATAAC TGGCACCTTG AGGATTATCA AACATTGTTT 
ACCCAACTCG CCTCAAAGGC CGTGACAGCA GGAGCGAAGT CATGA
 
Protein sequence
MQNRIDCPVS PWIKVGLLSS GLLGLALLGF AIAGLSMTVF AAQGNSTQAS VDVKTALSPK 
VTAMELISDG SPQAQSIARA ALLYASFWDT GDPRFAHWAL ATGFIDRTLP QGRAQGISGP 
LEASKTFRVA VPDLSVTVEH LLVVGDHAVV RLRFNGHFTG VFGEQRGQGQ KIDFRAVDMY 
RVREGFITDN WHLEDYQTLF TQLASKAVTA GAKS