| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4121 |
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| Symbol | |
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| ID | 1171734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4279454 |
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| End bp | 4280491 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345853 |
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| Product | hypothetical protein |
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| Protein accession | NP_719650 |
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| Protein GI | 24375607 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACG TATTAAAGTT ACTAGGATTG TTAGCCTTAA GCTATAGTTT TTCCTGCTTA
GCTCAAGTGT CTCATGTTAG CTTTAATGGA CCTATGTTTG AGTTAGGGTC CCACCCTAAG
ATGCGCGTTA ATGTGGTCAC TGATGATCAG GATATGACGC GTTTGGAGTT TGTATTGCGT
CAGTCAACGC GGGAAGAAAA GTTGATGGCG CTGCCAGTGA ATCGTTTTAT GTTGTTACTG
TTCGGGTTGG AGAATGTGAC AGATCCTAAA GCGCGATTGT TAGTTCGCGA ATATCGAGTC
GATCGGTGGT ATGAGGTGAA AAACCTGCCA CTGTTTGAGA ATGCAGGCTC TGGCGAATCA
TCGACATTGC TAGCAAAGAC AACGGTTGTT AAGCCGATAA AGGCCTCAAA GACGGAAGCT
AATTCGCTGA CTGCAAATGA TAAAGCCACA GCTGTTAAAT CAACCAAGAA TGCGACCGAG
GTTAATCTCG TGACCGCTGA AAAAGAAGTG GCGCCTATTG TTGTTGCCGC CGCTAGTGAA
TCGGCAGTGG TGCCTCGTTC CAGCGGATTT ACCTTCCCAG GGGATAAGCT TGAAGCCGAG
GTATCAAAGC CGCAGGCCTC TACAACAGAT AAATCAACTG CCACAGCACA GGCAACGCCG
GATGTGAATA CTCGTGGATC TGATAAGGTT GGCTCGAGTA ATGTGCCCGA AACTCAAACA
CAAAAATCTA TGCCAGAAGC GGCATCATCA GCCGACAATA ACGTTGTGAT TGCGGCCAGC
TCGGGGGGAT GTACTCTGGA TTATCATAAC GAAACCCTAT GGCGTATTTC CAATCGCTAT
GCTGTTGAAT GGCAAGTGAG TGTGTATGGC GCGATGTTGG CAATTCATGA TGCCAATCCT
AAGGCATTCT TTAAGAACCG CATTAACGCT TTAAAGAAAG ACGCGACTTT GTATTGTCCA
TCAATCGAGA TACTCGCCCG CTATCCCGAT GCAAAGGCTG CGAAGGCAAG TTTTGAGGAT
CGAGAAACTG GGAAATAG
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| Protein sequence | MSNVLKLLGL LALSYSFSCL AQVSHVSFNG PMFELGSHPK MRVNVVTDDQ DMTRLEFVLR
QSTREEKLMA LPVNRFMLLL FGLENVTDPK ARLLVREYRV DRWYEVKNLP LFENAGSGES
STLLAKTTVV KPIKASKTEA NSLTANDKAT AVKSTKNATE VNLVTAEKEV APIVVAAASE
SAVVPRSSGF TFPGDKLEAE VSKPQASTTD KSTATAQATP DVNTRGSDKV GSSNVPETQT
QKSMPEAASS ADNNVVIAAS SGGCTLDYHN ETLWRISNRY AVEWQVSVYG AMLAIHDANP
KAFFKNRINA LKKDATLYCP SIEILARYPD AKAAKASFED RETGK
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