| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4090 |
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| Symbol | |
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| ID | 1171704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4244212 |
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| End bp | 4245633 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637345824 |
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| Product | outer membrane efflux protein |
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| Protein accession | NP_719620 |
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| Protein GI | 24375577 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAT CACGTATGGC ATGGCTGGGT TTATGGTGTT TGCCCTCGCT CGCCCCGTTA
GCGACCTATG CCCAGCCCAG TAGTTTTACT GAGGCTTGGC AGCAAGTCCT TAAGGTGAGC
GATAAACTTC AGGCCCAATC CCAAGAGGTG AATCGCGCCA AGGGAGAGCA AGAGGCGGGC
GAAAGTTTAA ATCTGCCGTC CCTCAGTCTG AATGGCAGTT ATACCCACCT TGAAAAACCG
ATTGAATTAG ATTTAAGGGA TCTCAATCCC TTAGCTTCAC TTGATCCTGC GACCTTGCCA
CCCGCCCTCG GCGGCGCCTT GGCGAGTATT CCGGGATCAT TATTTGTTAC GCCTTTTACC
GAGCAAGATA TTTTCCGCGC CAGCTTACAG GCGATGTGGC CTATCTATAC TGGTGGGCAG
ATCACCGCAG CCCAAGGCAT TCATGCCGCC ATGGTGGCCG AGAAACAACA GGAATTACAG
TTAGCTAGCC GCGACTTATT CACTCAGTTG GTTGATAGGT ACTATGCCGT TGATGTGACT
CAGTCTTTAG TTAATACCCA AACTGAGCTG GTGGCCTCCT TAACTAAGCA CGTTGACCAT
GCGCTAGCCC TTGAACGTGA AGGACAAATT GCTAAAGTCG AGCGCCTCAA TGCCCAAGTC
GCCTTAGATA ATGCTAAGGT CAATTTAGGT AGCGCCCGCC GTCAACATGA AATGGCCGTT
ATCGCCCTAT CACGTATGTT ACAGCAGAGT GATGTCAGTA CTAACTCGCC GCTATTTGTG
CTGCCACAGG CGCCGTCATT GGGGGACTTG ACCCAAATGA CCTTAAATCA ACATCCGGCG
CTTAAACTGC TTGAGGCTAA AGAGGCGCAA GCCAATGGTT TGGTTTCCTT GGAGAAAGGT
AAATATCATC CCACGGTTTT TCTCTTTGGT AATTACACCC TATACGAAGA TGACAGCTTG
TTTTCTAAGG TCGAGCCGGA CTGGATGGTC GGCGTTGGAG TAAAAGTGCC CTTGCTGAGC
CGCGATGGCC GCAGTGGTAA AGTCGAAGCG GCTAAGAGCG CTTTGCTGCA AGCCCGTTAC
ACTAAGGCGC AAACACGCCA AGACTTAAGT TTGCTGCTCG ATCAAAGTTA TCGCCAGCTG
TTGCAGGCCG AGGAAGAGGT CAACTCACTC AATACCTCAC TTGAATTGGC GAGTGAAAAC
TTACGCCTAA GGGAAATCGC CTTTAATCAA GGGCTTTCAA CCTCTATTGA CAGAGTGGAT
GCCGAATTAA AACTGAGCGC AGTTAAAACT CAGCAACTCG GTGCCCGTTA TCGTTATGTG
CAAGCCTATG CCAGATTAAT GGCCATCAGT GGTCAATTAG ATGAATTTAT CGGTCGCAGT
GCCACAGGCA TTCAATCGCA GGAGACTATC AATGCGCGCT AA
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| Protein sequence | MKLSRMAWLG LWCLPSLAPL ATYAQPSSFT EAWQQVLKVS DKLQAQSQEV NRAKGEQEAG
ESLNLPSLSL NGSYTHLEKP IELDLRDLNP LASLDPATLP PALGGALASI PGSLFVTPFT
EQDIFRASLQ AMWPIYTGGQ ITAAQGIHAA MVAEKQQELQ LASRDLFTQL VDRYYAVDVT
QSLVNTQTEL VASLTKHVDH ALALEREGQI AKVERLNAQV ALDNAKVNLG SARRQHEMAV
IALSRMLQQS DVSTNSPLFV LPQAPSLGDL TQMTLNQHPA LKLLEAKEAQ ANGLVSLEKG
KYHPTVFLFG NYTLYEDDSL FSKVEPDWMV GVGVKVPLLS RDGRSGKVEA AKSALLQARY
TKAQTRQDLS LLLDQSYRQL LQAEEEVNSL NTSLELASEN LRLREIAFNQ GLSTSIDRVD
AELKLSAVKT QQLGARYRYV QAYARLMAIS GQLDEFIGRS ATGIQSQETI NAR
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