Gene SO_4081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4081 
Symbol 
ID1171699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4236494 
End bp4237825 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content47% 
IMG OID637345819 
Productamino acid permease 
Protein accessionNP_719611 
Protein GI24375568 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC AAAAACCGGG CTTAAAGCAA AGCCTTAATC TGTGGCAGGT GGTTGTGATG 
GGGCTTGCGT ACCTCACGCC TATGGCCGTG TTTGACACCT TCGGAATTGT CTCTGAGATC
ACCTCTGGCC ATGTGGCCAC TTCTTACTTG CTCGCATTAG CGGGGATTCT CTTTACCGCT
TTTAGCTATG GTCATTTAGT GCGTAAATAT CCCTATGCGG GGTCGGCTTA TACCTATGCT
CAAAAAAACT TTAGTCCAAA TGTCGGTTTT ATGGTGGGCT GGTCATCGCT ACTCGATTAT
ATGTTTATGC CGATGATCAA CATGCTACTG GCCAAAATCT ACCTCACCGC TATGTTCCCT
AATGTGGAAC CTTGGATTTT TATCTTTGGT TTAGTCACAG TTATGACGGT ACTCAACCTT
AGAGGCATTG ATTTAGTTGC GAATTTTAAT GGGGTTATCG TATTTGCCCA GATAGCGATT
ATCTTAGTGT TTATTGGCTT AATGGCCCAT AGCCTGTCCC TTGGGGAAGG TGAAGGGGTG
ATTGCCAGCG TGCGTCCATT CTATTCGGAG CAGGTAACCT TAGCGCCGCT CTTTACCGGT
GCAACCATTC TGTGTTTCTC CTTCTTAGGT TTTGATGGCT TAAGTTCGCT AAGTGAAGAA
ACTAAGGATG CAAAACGAGT CATCCCACGT GCTATTTTGT TGACGGCGTT GATTGGCGGG
GTGATTTTTG TCAGCGTGTC CTATTTCTTG CAACTCTATT TCCCTGATAT TTCTCGCTTC
GAGCAGTTGG ATGCCGTTTT GCCTGAGATT GCGCTCTATG TGGGCGGTAA TTTATTCCAG
TCTATTGTAC TAGTGGCGAC AACAATTGCG GTGTTAGCTT CGGGCATGGC AGCTCATGCG
GGGGTGGCGC GCATCCTCTA TGTGATGGGG CGCGACAATA TGTTGCCCAA TAAAGGCTTT
GGTTATGTTC ACCCTAAATG GCGTACCCCG GCATTTAACG TGGTTCTGGT GGGGTTACTG
GCGCTTTCGG CGGTGTCCTT TGATTTAGAA ATGGCTTTAG CCTTAGTGAA CTTCGGTGCT
TTAGTTGCCT TTACCTTTGT TAACCTGTCG GTGATTGTGC AGTTTTATAT TAAAGAAAAA
CGTAATCAAT CCCTTAAGGA GCATTTGCAG TATTTCGTTT TGCCCTTGTG TGGCGCGGCA
ACCATTGGCG TGCTGTGGAT TAACCTTGAG CCTCAGTCAT TAGAACTCGG TTTAATTTGG
GGAGCTGTGG GGATGCTGTA TCTGGCGCTG CGCAGCCTAC GCTTGCGCAA GGCGGTAGAA
TTGCAGAGTT AA
 
Protein sequence
MSQQKPGLKQ SLNLWQVVVM GLAYLTPMAV FDTFGIVSEI TSGHVATSYL LALAGILFTA 
FSYGHLVRKY PYAGSAYTYA QKNFSPNVGF MVGWSSLLDY MFMPMINMLL AKIYLTAMFP
NVEPWIFIFG LVTVMTVLNL RGIDLVANFN GVIVFAQIAI ILVFIGLMAH SLSLGEGEGV
IASVRPFYSE QVTLAPLFTG ATILCFSFLG FDGLSSLSEE TKDAKRVIPR AILLTALIGG
VIFVSVSYFL QLYFPDISRF EQLDAVLPEI ALYVGGNLFQ SIVLVATTIA VLASGMAAHA
GVARILYVMG RDNMLPNKGF GYVHPKWRTP AFNVVLVGLL ALSAVSFDLE MALALVNFGA
LVAFTFVNLS VIVQFYIKEK RNQSLKEHLQ YFVLPLCGAA TIGVLWINLE PQSLELGLIW
GAVGMLYLAL RSLRLRKAVE LQS