| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4072 |
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| Symbol | rimO |
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| ID | 1171692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4226192 |
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| End bp | 4227637 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637345812 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | NP_719602 |
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| Protein GI | 24375559 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGTTG AAACTTTTCA TCCTAAGCAA ACAACCACGC TTGAGACCCC TGCCAAAACA
TTAGAAGCCG CCAGTGCTGA CTCTGTTAAT ACGGGTAATG TTGCCACAGG CAATCGCATC
GGTTTTGTGT CTTTAGGTTG TCCCAAAAAC CTCGTGGACT CAGAGCGCAT TCTGACCCAG
TTACGCATTG ACGGCTATGA AGTAACCAAC AGCTACGACA ATGCCGATCT AGTGATCGTT
AACACCTGTG GTTTTATCGA TGCGGCGGTT GAAGAATCCT TAGATGCGGT GCGCGAAGCC
TTAGAAGAAA ACGGCAAAGT GATCGTGACC GGCTGCTTAG GCGCCAAAGA AAACCAAATC
CGCGAAGTAC ACCCAGACGT ACTCGAAATC ACAGGCCCAC ACAGCTACGA AGCCGTGTTA
AAGCACGTCC ACAAGTACGT GCCAAAACCA GAGCACAATC CCTTTACCTC GTTAATCCCA
CAAACTGGGG TCAAGTTAAC GCCTAAGCAT TATGCTTATT TAAAGATTTC AGAAGGTTGC
GACAACCGCT GTACCTTCTG CATCATCCCT GCACTGCGTG GCGATTTAGA TAGCCGCGGC
GCGGGTAGCG TATTAGATGA GGCCAAACGT TTAGTTGAAG CTGGCGTACA AGAAATCCTT
GTGGTGAGCC AAGACACCTC TGCCTACGGT AAAGACAAAG GCGGTCGCAC CGATTTTTGG
AACGGTATGC CAGTTAAGCA AGACATCACC AGCCTTGCTC GCCAACTTGG CAAAATGGGC
GCGTGGGTAC GCTTACATTA CATCTACCCA TATCCATGGG TTGACGATCT GATCCCATTA
ATGGCCGAAG GCTTAATCCT GCCTTACTTA GATATTCCAA TGCAGCACGC TAGCCCACGC
ATCCTGAAGA TGATGAAACG CCCAGGCCGT GTTGACCGTC AATTAGAAGC CATCCAACGC
TGGCGCGAAA TCTGCCCAGA TTTGGTTATC CGCTCAACCT TTATCGTGGG CTTCCCGGGT
GAAACCGAAG AAGACTTCGA AATGCTGCTC GACTTCCTGC GTGAAGCACG CCTCGACCGC
GTTGGTTGCT TCAAATACTC AGAAGTGGAA GGCGCTGTCG CCAACACCAT CGCCGAGCTT
ATCAGTGAAG AAGTCAAAGA AGACAGATAC CACAGATTTA TGGAAGTCCA AGCCGAGATC
AGCGCCGAGC GTTTAGCGCG CTTTGTTGGC CGCACCATGG ATATCCTGAT CGATGATGTT
GACGAAGAAG GCGCGATTGG CCGCAGCTTC GCCGATGCCC CAGAAATCGA CGGTATGGTA
TTTATCAACG GTGAAACCGA ACTCGAACCC GGCATGTTAG TTCGCGCCGT GATCACTCAC
TCAGATGAGC ACGATCTGTG GGCCGAGTTA GTGGATGCCG ATGCTGAGGA TGAAGTCGAA
GCTTAA
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| Protein sequence | MTVETFHPKQ TTTLETPAKT LEAASADSVN TGNVATGNRI GFVSLGCPKN LVDSERILTQ
LRIDGYEVTN SYDNADLVIV NTCGFIDAAV EESLDAVREA LEENGKVIVT GCLGAKENQI
REVHPDVLEI TGPHSYEAVL KHVHKYVPKP EHNPFTSLIP QTGVKLTPKH YAYLKISEGC
DNRCTFCIIP ALRGDLDSRG AGSVLDEAKR LVEAGVQEIL VVSQDTSAYG KDKGGRTDFW
NGMPVKQDIT SLARQLGKMG AWVRLHYIYP YPWVDDLIPL MAEGLILPYL DIPMQHASPR
ILKMMKRPGR VDRQLEAIQR WREICPDLVI RSTFIVGFPG ETEEDFEMLL DFLREARLDR
VGCFKYSEVE GAVANTIAEL ISEEVKEDRY HRFMEVQAEI SAERLARFVG RTMDILIDDV
DEEGAIGRSF ADAPEIDGMV FINGETELEP GMLVRAVITH SDEHDLWAEL VDADAEDEVE
A
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