Gene SO_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4048 
Symbol 
ID1171673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4201835 
End bp4202461 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content52% 
IMG OID637345793 
Productcytochrome c family protein 
Protein accessionNP_719578 
Protein GI24375535 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA AAATTAAAAC ATTAGCCAAA GGCATCGCGC TCATTAGCGG CTGTGCCTTG 
ACCTCTGTCG CCATGGCAAA TACCTCTGTA ATCCCGCCTG CGGGACAAAT CTGTGTCAGT 
TGTCATGGCG TTGAAGGTGA GGGCGTAGAG CCACTTGGCC CGCGCTTAGC CGGACTCTCG 
AAAGAATACA TCACCACCCA ATTGCAGCAT TTTCAGGCGG GAGTGCGCCA AAACGCGACC 
ATGATGCCGA TGGCGATGAC TCTGCAAGGT GATGGCATCG AGCAAGTGGC GAGTTATTTC 
TCCGCTAAAT CACCTAAAAC CGAGGTTAAG CCAGTGCTCC GCGGTACGCA TGTCACCTTT 
AGTGATGATA CCGCACGCTT AGCTTACCAA GGCGATTGGT CACGTGGCTT ACCCGCTTGT 
GTGACTTGCC ATGGCCCCTC TGGATTAGGT GGCGATTTGT TCCCGCGTTT AGCGGGTCAG 
CAGGCCAGCT ATATCAAGAC GCAACTGTTG GCGTGGCAAG CAGGCACTCG TAAAGGAGAT 
GTGGACGGCA TGATGGCCAA TGTGGCTAAC AAGCTAACCG CCGCCGAGGT GGATGCCTTA 
GCGAATTACT TTGCGAATAT AAAATAA
 
Protein sequence
MNNKIKTLAK GIALISGCAL TSVAMANTSV IPPAGQICVS CHGVEGEGVE PLGPRLAGLS 
KEYITTQLQH FQAGVRQNAT MMPMAMTLQG DGIEQVASYF SAKSPKTEVK PVLRGTHVTF 
SDDTARLAYQ GDWSRGLPAC VTCHGPSGLG GDLFPRLAGQ QASYIKTQLL AWQAGTRKGD 
VDGMMANVAN KLTAAEVDAL ANYFANIK