Gene SO_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4040 
Symbol 
ID1171666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4194526 
End bp4195575 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content49% 
IMG OID637345786 
Productintegral membrane domain-containing protein 
Protein accessionNP_719570 
Protein GI24375527 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTACGC TAGATCTTAG CGCGGTGCGG TGCCAGAATG GCGTTCCTTT CCTGCGGTAT 
TATTGGAACT TACCCGTGAA TCAAAGCCAT TCAGGCCCCT TGGCAAATAA CCATGCTCAA 
TTGGGATTAT TGTTTATTTC TGTCGCCGTG CTGTTTTGGG GCATGTTACC CATAGCGCTT 
AAGCTATCGG GGAGTTTTAT CGATCCGGTG ACCTTGACTT GGTTCCGGTT TTTAGTGGCG 
CTCATCGTCA GTATTTTGGT GCAGTGGAGC GCGGGCAGTT TAAAGCAGTT TGCGGCACTC 
GATGCCAAGG TTTGGCTCAG GCTTATCCTC GCCGGACTGT TTTTAATGCT TAACTATGTG 
TCATTCGTCT ATTCCCTCGA CTATTTAGCC CCGGGCGCGG CGCAGCTTAA TTTTCAAACC 
TCGCCGTTTT TTCTCGCCTT TGGCGGCGTG TTGTTTTTTA AAGAACGCTT GAATGCGATA 
CAGCTGAGTT GTTTTGCTTC CTTAGCTTTA GGGATGTTAA TGTTTTTCCA TCCCTTTTTA 
GATTTTTCGG CAACTGATAA TCATGAGATC TGGCTTGGGG TGATGATAGT GCAGTTTTCG 
GCACTGTCAT GGACCACATA CGCACTGCTG CAAAAGTCAC TGTTGAACCG TTTGTCCCCT 
GCCAACGTAC TCTTGGTTAT CTATGCCTTA GGTATTTTTG CGATGGCGCC CTTTAGCGAC 
TTTAGCCAAT TTGCGCAAAT GAATAGCTTT GACTGGCAAG TGGCGCTGTT TTGCGCCGCG 
AATACCTTGA TTGCCTATGG CTGTTTTGGG CAATCAATGA AGTATTGGCC GACGGCGCAG 
GTGAGCGCCA TGTTGGCGTT AACGCCAGTA TTTAGCTTTA GCGCCACGGC GTTAGTGGTG 
AGTATCGGTT GGTGGCCTGA AGTGTTTAGG GCCGATGAGT TAGATGCTTT ATCGCTCTTT 
GGCATAGGTG TGATTATTGT CTCTGTGATG GTGGTGCAGT TGCTGCCCCT GTATCGCCAG 
CGCCGCGCGA GACGTTTACA ACCCATTTAA
 
Protein sequence
MLTLDLSAVR CQNGVPFLRY YWNLPVNQSH SGPLANNHAQ LGLLFISVAV LFWGMLPIAL 
KLSGSFIDPV TLTWFRFLVA LIVSILVQWS AGSLKQFAAL DAKVWLRLIL AGLFLMLNYV 
SFVYSLDYLA PGAAQLNFQT SPFFLAFGGV LFFKERLNAI QLSCFASLAL GMLMFFHPFL 
DFSATDNHEI WLGVMIVQFS ALSWTTYALL QKSLLNRLSP ANVLLVIYAL GIFAMAPFSD 
FSQFAQMNSF DWQVALFCAA NTLIAYGCFG QSMKYWPTAQ VSAMLALTPV FSFSATALVV 
SIGWWPEVFR ADELDALSLF GIGVIIVSVM VVQLLPLYRQ RRARRLQPI