| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4028 |
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| Symbol | ssb |
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| ID | 1171655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4182420 |
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| End bp | 4183136 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637345775 |
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| Product | single-strand binding protein |
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| Protein accession | NP_719558 |
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| Protein GI | 24375515 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0629] Single-stranded DNA-binding protein |
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| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTC GTGGTGTTAA CAAGGTAATT TTGGTTGGCA ATTTGGGACA AGATCCAGAA
GTACGTTACA TGCCAAACGG TAACGCAGTC GCTAACATTA CAGTGGCGAC CAGCGAATCG
TGGAAGGACC AACAAGGTCA ACAGCAAGAA CGTACTGAAT GGCACCGTGT GGTTCTGTTT
GGAAAATTAG CTGAAATCAC TGGTGAGTAC CTGCGTAAAG GTTCGCAGGT TTACCTCGAA
GGTAAATTGC AAACCCGTAA GTGGAAAGAC CAAAGTGGCC AAGACCGTTA CTCAACGGAA
GTGGTGATTG ATCAAAGCGG TAGCATGCAA ATGCTAGGTA GCCGCAACCA AGGTGGTCAA
GGTGCCCCAA TGGGGGGGAT GCCACAAAAC GGCGGTTACC AATCAGCCCC ACAACAAGCT
GCTCCTGCGC AAAACCAATA CGCGCCAGCA CCGCAAGCGG CTCCGGCTTA TCAAGCACCA
GCGCCACAAC CTCAATCTGG CTACAATCAG CCTCCAGCTC AGCAAAGCTA TGGTCAGCAA
CAGGCGCAAC CCCATGTTCA GCCTCACGCT CAGCCACAGC AGGGCGGTTA TGCACCTAAG
CCTGCAGCTC CGGCGTATCA AGCGCCAGCG GCTCCTGCAC AGCGCCCTGC GCCACAGCCA
CAGCAAAACT TTACTCCAGA TTTGGATGAC GGTTGGGACG ACGATATCCC GTTCTAG
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| Protein sequence | MASRGVNKVI LVGNLGQDPE VRYMPNGNAV ANITVATSES WKDQQGQQQE RTEWHRVVLF
GKLAEITGEY LRKGSQVYLE GKLQTRKWKD QSGQDRYSTE VVIDQSGSMQ MLGSRNQGGQ
GAPMGGMPQN GGYQSAPQQA APAQNQYAPA PQAAPAYQAP APQPQSGYNQ PPAQQSYGQQ
QAQPHVQPHA QPQQGGYAPK PAAPAYQAPA APAQRPAPQP QQNFTPDLDD GWDDDIPF
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