Gene SO_4015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4015 
Symbol 
ID1171642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4160082 
End bp4161389 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content49% 
IMG OID637345762 
Producthypothetical protein 
Protein accessionNP_719545 
Protein GI24375502 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGGCA CTGAGCTTGG ATCGGTGCTT GGCGATGAAG TTAAATCGGT GCTTGGCGAT 
GAAGTTGAAT CGGTACTTGG CGCTGAGCTT GAGCCGGTGC TTGCGCCAGC GTTTGAAGTG 
ACAGGCTTAT CTTGCGTACT TTTATCGTCA ATGACGTTAA TTTGGCTATC GGACTTAAGG 
TTTTGCATGC CCGTCTTAAC CACAAGATCG CCCTTGGCTA AACCTTCGGT CACCACCGTA 
TAA
 
Protein sequence
MFKQRVTKQA RSACDISFTS HHSHFSKAPL FAPLPFLWVS LLACTAFSSL AADKIDIIPV 
TVEAVKEASF ADVVKEVGKI NAIDSAILSF NASEKISAIH FSNGDKVTKG QVIAEQDNTK 
AKADLDKAKS TLALAKTKLE RIEDLLIKEP FALAKQDVDE LRENVNLADA DFRQKQATMN 
DYLIKAPFDG QLTSFSQSIG SQIAAGTALV TLYSLNPVEV RYAISQHDFG KAQKGQGVNV 
TVEAYANKVF KGTVNYVAPA VDESSGRVEV HAALDNSEFK LAPGMFANIK QFYSQGVACL 
LVPQNSIIAN NDERFVWLVR GNNAVKQIIK LAQNTNDGYT VVTEGLAKGD LVVKTGMQNL 
KSDSQINVID DKSTQDKPVT SNAGASTGSS SAPSTDSTSS PSTDLTSSPS TDPSSVPNTG 
SSSASNTAPN AKGAQ