Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4005 |
Symbol | |
ID | 1171633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4146915 |
End bp | 4147787 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345753 |
Product | hypothetical protein |
Protein accession | NP_719535 |
Protein GI | 24375492 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCGCC TAGGTCGGCA GCAGTTGCAA CTCTTGGAGG GCGTTTACCT TAATCGCTCT CCAAGGGTAA AACTCAATGC TAACTGGCGA ACGATTTACC GCGAGTTAGA AGTGGGCGAG CTGGATGGTG CGGAAAAATA TTTATGCTTT GCGCCCCGTG ATTTTGAACT GTTAAGGCAG GGCGTATTAG CGCTAATGGG GCTCGATCTT AGGGATCTGG ATTTCAATGT CGATCGCATG GCTATGTCCA GCAAAAGTCA TAATGAGAAA CTCGCTAAGA TCCGCCCAGA AGCCGAATAT CTGTTACTCA AGTTTCTAGG CTTTCAATCA CCCCCTTTTG CAGTATCTGC TTTATCCTCG CTACGAATGC CATTGGCGAC GGCACAAATG CTCTGCGATG AACAACATGT TAACGCCATC TTAGTGGTTG AAAACCTAGA TGTATTTGAT GCTATCCACC AAGCGCTTTT ACCTGAGGAT TTAACTAATG TGATGGTTAT CTACCGAGGT AGTGGTCATC ATTCCCCCAT AGGTGTGCGC CAGTTTTTAC AGGCGATGGT AGGTAAAATG CCGATTATTG CCTTTACCGA TCTTGACCCC GCAGGGCTGC AAATTGCCCA TACCTTAACG GGCATGAGCC ATTGTATCGT GCCGCAGTTA GCACTTTTCG CGCCCTGCGA GTTACTCGCT ATTCCGCAGA TTAATTCCCT CGATGATTTT GCTAAGCAAG CACCTCAGGC TAAGTATTTA CAGTCAGCCG ATTTAAAAAA TTGGCAGCAA TTAAGCTTTT GGTTAACTCA GCAGCGAATT AGCATTAAAC AGCAACACCT GCTAGCGCAT CGGCTTGAGC TAGTGCTACT GGCATACTGT TAA
|
Protein sequence | MARLGRQQLQ LLEGVYLNRS PRVKLNANWR TIYRELEVGE LDGAEKYLCF APRDFELLRQ GVLALMGLDL RDLDFNVDRM AMSSKSHNEK LAKIRPEAEY LLLKFLGFQS PPFAVSALSS LRMPLATAQM LCDEQHVNAI LVVENLDVFD AIHQALLPED LTNVMVIYRG SGHHSPIGVR QFLQAMVGKM PIIAFTDLDP AGLQIAHTLT GMSHCIVPQL ALFAPCELLA IPQINSLDDF AKQAPQAKYL QSADLKNWQQ LSFWLTQQRI SIKQQHLLAH RLELVLLAYC
|
| |