Gene SO_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4005 
Symbol 
ID1171633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4146915 
End bp4147787 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content47% 
IMG OID637345753 
Producthypothetical protein 
Protein accessionNP_719535 
Protein GI24375492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCC TAGGTCGGCA GCAGTTGCAA CTCTTGGAGG GCGTTTACCT TAATCGCTCT 
CCAAGGGTAA AACTCAATGC TAACTGGCGA ACGATTTACC GCGAGTTAGA AGTGGGCGAG
CTGGATGGTG CGGAAAAATA TTTATGCTTT GCGCCCCGTG ATTTTGAACT GTTAAGGCAG
GGCGTATTAG CGCTAATGGG GCTCGATCTT AGGGATCTGG ATTTCAATGT CGATCGCATG
GCTATGTCCA GCAAAAGTCA TAATGAGAAA CTCGCTAAGA TCCGCCCAGA AGCCGAATAT
CTGTTACTCA AGTTTCTAGG CTTTCAATCA CCCCCTTTTG CAGTATCTGC TTTATCCTCG
CTACGAATGC CATTGGCGAC GGCACAAATG CTCTGCGATG AACAACATGT TAACGCCATC
TTAGTGGTTG AAAACCTAGA TGTATTTGAT GCTATCCACC AAGCGCTTTT ACCTGAGGAT
TTAACTAATG TGATGGTTAT CTACCGAGGT AGTGGTCATC ATTCCCCCAT AGGTGTGCGC
CAGTTTTTAC AGGCGATGGT AGGTAAAATG CCGATTATTG CCTTTACCGA TCTTGACCCC
GCAGGGCTGC AAATTGCCCA TACCTTAACG GGCATGAGCC ATTGTATCGT GCCGCAGTTA
GCACTTTTCG CGCCCTGCGA GTTACTCGCT ATTCCGCAGA TTAATTCCCT CGATGATTTT
GCTAAGCAAG CACCTCAGGC TAAGTATTTA CAGTCAGCCG ATTTAAAAAA TTGGCAGCAA
TTAAGCTTTT GGTTAACTCA GCAGCGAATT AGCATTAAAC AGCAACACCT GCTAGCGCAT
CGGCTTGAGC TAGTGCTACT GGCATACTGT TAA
 
Protein sequence
MARLGRQQLQ LLEGVYLNRS PRVKLNANWR TIYRELEVGE LDGAEKYLCF APRDFELLRQ 
GVLALMGLDL RDLDFNVDRM AMSSKSHNEK LAKIRPEAEY LLLKFLGFQS PPFAVSALSS
LRMPLATAQM LCDEQHVNAI LVVENLDVFD AIHQALLPED LTNVMVIYRG SGHHSPIGVR
QFLQAMVGKM PIIAFTDLDP AGLQIAHTLT GMSHCIVPQL ALFAPCELLA IPQINSLDDF
AKQAPQAKYL QSADLKNWQQ LSFWLTQQRI SIKQQHLLAH RLELVLLAYC