Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3965 |
Symbol | ptsO |
ID | 1171601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4105178 |
End bp | 4105453 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637345721 |
Product | phosphocarrier protein NPR |
Protein accession | NP_719495 |
Protein GI | 24375452 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAGC TTGAACGCCA AGTCACCATT TGCAATAAAC TCGGCTTGCA TGCCCGCGCC GCCACAAAGC TCGTGGTGCT TGCTTCTGAG TTTGATGCCA GCATTACCCT GATCCAAGGT GAAAAACAGG CCTCTGCCGC CAGTGTATTA GGGCTATTAA TGCTTGAGAC GGGTATGGGT AAAACCATCA CCTTGATTGC CGAAGGCCCG GATGCAGAAC CCGCCCTCAA TGCCATTTGC GCACTGATAG ACGCTAAGTT CGACGAAGCC AGCTAA
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Protein sequence | MPKLERQVTI CNKLGLHARA ATKLVVLASE FDASITLIQG EKQASAASVL GLLMLETGMG KTITLIAEGP DAEPALNAIC ALIDAKFDEA S
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