Gene SO_3948 details

Gene Information

• Locus tag: SO_3948
• Symbol: murA
• ID: 1171585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4093440
• End bp: 4094699
• Gene Length: 1260 bp
• Protein Length: 419 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637345705
• Product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
• Protein accession: NP_719478
• Protein GI: 24375435
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase
• TIGRFAM ID: [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATAAAT TAGCAATTCA GGCAAGCCCT CCGCTTGCTG GTGATGTGAT TATTTCGGGT 
GCTAAAAACG CTGCTCTGCC CATTCTAATG GCAGGTGTGT TAGCCGAAAC TGATTTTGTG 
GTCTCAAACG TTCCCAATTT GCGCGATGTC AGCACCAGTT GTAAATTGCT GCGCTGCCTT 
GGCGCCGATG TGGATGAGTT GGGCGAAGGT AAGATCCGTA TTTCTACCAA GAATCTCAAT 
GAATTCTGCG CACCTTACGA TTTAGTTAAG ACTATGCGTG CCTCGATTCT GATCCTTGGC 
CCTTTATTGG CGCGCTATGG CACTGCAGAT GTGTCATTGC CTGGTGGCTG CGCCATTGGT 
GCCCGTCCAG TTAACCTTCA CTTACATGGC CTTGAAATGA TGGGCGCCAA GATTGAAGTG 
AAAGAAGGTT ATATCAAAGC CCGTGTCGAT GGTCGCTTAA AAGGCGCCCA TATTTTTATG 
GATATGGTCA GTGTTGGTGC AACCGAAAAC CTACTGATGG CCGCAGCCCT TGCCGATGGC 
GAAACCGTGA TTGAAAACGC GGCCCGTGAG CCAGAAGTGA TCGACTTGGC TAACTGTTTG 
ATTGCCATGG GTGCAAAAAT CACCGGTGTA GGCAGTGCTA CTCTGCGTAT TCAAGGGGTT 
GAGCGTTTAC AGGGCTGTGA GTATCGCGTG ATGCCAGATC GTATTGAAAC TGGTTCATTC 
CTCGTTGCCG CCGCCGTGAC CCGTGGTCGT ATCCGTTGCT TAAAGGCAGA CCCTGCTTCG 
TTAGAATCGG TAATCGCCAA ACTTGAAGAT GCGGGCGCCA AGATCACCAC AGGTGAAGAT 
TGGATTGAGC TGGATATGGA AGGCAAGCGT CCAAAAGCCG TGAATATCAA AACCGCGCCA 
TACCCTGGTT TCCCAACCGA TATGCAGGCA CAGTTCTGCG TGCTCAACGT ATTAGCGCAG 
GGCACGGCAA CGATTACCGA AACCATCTTC GAAAACCGCT TTATGCACGT ACCAGAACTC 
ATCCGTATGG GCGCGACCAT GGAGCTTGAA GGCAATACCT GCATTATTCA AGGCATTGAG 
TCTTTGAGTG GTGCGCAGGT AATGGCGACC GATTTACGTG CTTCGGCAAG TCTAGTGATC 
GCAGGCTTAG TCGCCGATGG TAAAACTATC GTCGACCGCA TCTATCACTT AGACCGCGGC 
TACGAGCATA TTGAGCAGAA ATTCCAAGGA TTGGGCGCGC ATGTAGAACG TGTGCAATAA 

 

Protein sequence

MDKLAIQASP PLAGDVIISG AKNAALPILM AGVLAETDFV VSNVPNLRDV STSCKLLRCL 
GADVDELGEG KIRISTKNLN EFCAPYDLVK TMRASILILG PLLARYGTAD VSLPGGCAIG 
ARPVNLHLHG LEMMGAKIEV KEGYIKARVD GRLKGAHIFM DMVSVGATEN LLMAAALADG 
ETVIENAARE PEVIDLANCL IAMGAKITGV GSATLRIQGV ERLQGCEYRV MPDRIETGSF 
LVAAAVTRGR IRCLKADPAS LESVIAKLED AGAKITTGED WIELDMEGKR PKAVNIKTAP 
YPGFPTDMQA QFCVLNVLAQ GTATITETIF ENRFMHVPEL IRMGATMELE GNTCIIQGIE 
SLSGAQVMAT DLRASASLVI AGLVADGKTI VDRIYHLDRG YEHIEQKFQG LGAHVERVQ