Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3933 |
Symbol | |
ID | 1171571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4077285 |
End bp | 4078709 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637345692 |
Product | hypothetical protein |
Protein accession | NP_719464 |
Protein GI | 24375421 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAATC AGCTGCGCAC TTTTGCCTCT TTATATAGTA CGACCCTTTT GACTGTGCTC GCGGGTGGCT TACTGACCAC CTACTTAGGT CTGCGTCTCT CTGTGATACA TGTTCCACAG CTATGGATTG GCGGCATGAT GTCAGCGTAC TATGTCGGCC TTGTTGCAGG TTCTAAGATA GGCCATCGAC TAATAGCACA AGTGGGCCAT ATCCGCGCCT TTGTCGCCAG TGCGGGGATT GTCGCCGCCT GCGCGCTTGG CCACGCACTC GTGGATCAAT TAGCGGTTTG GCTCCTATTA AGACTGATTG TCGGCATGGG CATGATGTGT CAATACATGG TGCTCGAAAG TTGGCTCAAT GAGCAGGCAG AAAGTAGCCA ACGCGGTACA GTGTTTGCCA GCTACATGAT CGTCTCGTAC TTCGGCTTGA TATTAGGCCA AGGTGCCATC AGCCTGTATC CCGAATTAGG TCTAGAGCCA CTATTGCTGA TAGCCATTTG CTTCGCCCTA TGCATAGTTC CGATTTCTTT AACGCGGCGA ATTCACCCCG CGCCACTGGT GCCTGCACCC TTAAAAATCG CTCACTATTG GCAAAAGGCT CCGCAAGCAC TGACCACCAT CGCCATCGGC AGCATGATTG TCGGATCTTT TTACGGTCTC GCACCCGCCT ATGCGAGCAA TCTTGGTCTG CCTCCAGAAA AAGTCGCCAC CTACATGACC GCGACAATTT TAGCCGGTCT ACTTGCCCAA TGGCCAATGG GAAAATTATC CGACATTATG TCCCGTAGCC GACTTATCCG TATTAACTGC GTGCTGCTTG GGATCTTAGC CTTAGGCATC GCCCTCACTC CATATCATCC AACAGTCTCA CTGGTGATGA CGTTTCTATT CGGTATCCTA GGCTTTACCT TTTACCCCTT AGCAACCGCA CTGGCGAACT CCCGTGTCGA GCAAAGTGAA AGGGTTGGAC TGTCGGCAAC CATTTTGCTC ACCTTTGGCA TGGGCGCCAG TATCGGCCCG CTTATCGCCT CGACCCTCAT GCAATGGTTT GGTAACAGTA TGCTCTACGG TTTTATGTCG GCCTGTACTG TAATCCTGTT TTTACGACTA CGTTATGTTC ACTCGCAGCA AAAGGCCGAA ACGAATGTCA CCCAAGACTA TATGATGGCA ACCGGTGACT TAGTCTCATC ACCACTGGCC GCAGCGCTCG ATCCGAGGGT AGATGTAGAA TCGGTTCAGG AACACATGAC ACCGACACCG CAGGAAGATC AAGAAGATTT AGGTGCCGAT ACCAATGAAG ATGCTGAAAA TGACAACGAG CACCAACTCA CATTCGAGTT TCAATTTGAC CCCGAGCCAG CTTTCATCCC TGAGGTTGAA AACCAAGTCA CAGCGCACAA TCTTGATGCA GTGAAAACCA GCTAA
|
Protein sequence | MANQLRTFAS LYSTTLLTVL AGGLLTTYLG LRLSVIHVPQ LWIGGMMSAY YVGLVAGSKI GHRLIAQVGH IRAFVASAGI VAACALGHAL VDQLAVWLLL RLIVGMGMMC QYMVLESWLN EQAESSQRGT VFASYMIVSY FGLILGQGAI SLYPELGLEP LLLIAICFAL CIVPISLTRR IHPAPLVPAP LKIAHYWQKA PQALTTIAIG SMIVGSFYGL APAYASNLGL PPEKVATYMT ATILAGLLAQ WPMGKLSDIM SRSRLIRINC VLLGILALGI ALTPYHPTVS LVMTFLFGIL GFTFYPLATA LANSRVEQSE RVGLSATILL TFGMGASIGP LIASTLMQWF GNSMLYGFMS ACTVILFLRL RYVHSQQKAE TNVTQDYMMA TGDLVSSPLA AALDPRVDVE SVQEHMTPTP QEDQEDLGAD TNEDAENDNE HQLTFEFQFD PEPAFIPEVE NQVTAHNLDA VKTS
|
| |